Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq6 369 7e-97
seq2 318 1e-81
>seq6
Length=3777980
Score = 369 bits (408), Expect = 7e-97
Identities = 1219/1882 (65%), Gaps = 70/1882 (4%)
Strand=Plus/Minus
Query 212556 GTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGG 212615
|| ||||| | || ||||||||||| |||| || || |||||||| || ||||| ||
Sbjct 3776869 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 3776810
Query 212616 CCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCA 212675
||||| |||||||| | |||||| | ||||| || || ||||
Sbjct 3776809 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCA-----------TGGTA- 3776762
Query 212676 TCCTCGTGGCCCAGATGT--AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGT 212733
| | || ||||| | ||| ||||||||| |||||| ||||| |||| | ||
Sbjct 3776761 -----GGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGT 3776707
Query 212734 CAGCGGCCATGTCTATGATATCTCT-CTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792
|||||||||| || ||||| || || ||| || | |||||||||||||||| | | ||
Sbjct 3776706 CAGCGGCCATCTCAATGAT-TCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCC 3776648
Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGC 212852
|||| |||| || | | ||||||||||||||| || || ||| |||| |
Sbjct 3776647 TTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGATCCGTTGT-------CAGCAAC 3776595
Query 212853 AGG-CG------CATGTCCTCGTTCCAGAGGCC--CCTGGTCTCCAGGCACTTGACCAGG 212903
| || |||| ||||||||| ||||| ||| | |||| ||||| |||
Sbjct 3776594 AATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCTCAAC--CAGGTCCTTGAGCAGC 3776537
Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963
|||||||| |||||||| ||||| | || || | | ||||| ||| ||||||
Sbjct 3776536 CAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGTG 3776477
Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023
|||||||||| || ||| ||| || |||||||| | |||| ||| ||||||||||||
Sbjct 3776476 TAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGGA 3776417
Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAG 213083
|| |||| || ||| | || || || ||| | | || || ||||
Sbjct 3776416 GCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCAC 3776357
Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143
||||| | || | ||| |||||||||| | || ||||| | | ||
Sbjct 3776356 TCCCA-CAGCTCGGAAGGAG--------TCACGTTCCAGAGATCGAACTGGAGGTCACCC 3776306
Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
||| | ||| ||||||| | | ||||| || | ||| |||| |||| |
Sbjct 3776305 TTGGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAA 3776246
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| || | | || ||| ||||||||| || || |||| |||||||||||||||||
Sbjct 3776245 GAGGCTTCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCC 3776186
Query 213264 TCTGGGGACGTGAAGGGCA-TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322
|| |||| || || | || | || || || || ||||| |||||||| ||
Sbjct 3776185 TCCTCGGACTCAAATGGGAGTCGTAGAGCCATG-AAGGTGTCGGCCAGACCCTGGACACC 3776127
Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382
| | ||||||| ||||| || ||||||||| | ||| | ||||| ||||
Sbjct 3776126 CAGAGCAATGGGTCGGTGTCGCATGTTAGACTTCTTGGCCTCGGGGACCGGGTAGTAGTT 3776067
Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442
| ||||||||| ||||||||| || || |||| | | | ||| | ||
Sbjct 3776066 TCGGTCGATGATAGCGTTGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTT 3776007
Query 213443 G---TGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGC 213496
| | | |||| || | |||| | ||||| ||||| |||||| ||
Sbjct 3776006 GAAGTCGTAGAACGAGTTGGTGTCGTCTCGAGTAACAAAAGTGGGCAGAGCGATGGAAGC 3775947
Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556
||||||||| || || ||||| | || | |||||| | ||||| |||||||||
Sbjct 3775946 CAGGTTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTT 3775887
Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTA 213616
| || || || ||||||| ||||| |||||| |||| || ||||||||
Sbjct 3775886 AGAAGACTTAATTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTA 3775827
Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCT 213676
|||||| ||||| |||| ||| |||| | | || || ||| ||| || | |
Sbjct 3775826 CAGCATGAAGGGGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG 3775767
Query 213677 GGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT 213736
||| || || | | | || | | ||||||||| ||||| |||| ||
Sbjct 3775766 GGCAGGGATGGTTCGTCGGCCTCGGCCCTCCTT---CTCGTACTGCTCGTACAGCTGCTT 3775710
Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796
|| || | || |||| ||| || || || || ||| ||||| ||| ||||
Sbjct 3775709 AAACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCA 3775650
Query 213797 GTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855
|| ||| | ||| ||||| || |||||||||||| |||| |||||| || |||||
Sbjct 3775649 TTCAGCGTTCTGCTC-GACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACA 3775591
Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915
|||| | || | |||| ||| ||| ||| || ||||| || || || ||||
Sbjct 3775590 GGTCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGA 3775531
Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCT 213972
| || ||||||| ||||| | ||| || |||||||| || | || | ||||| ||||
Sbjct 3775530 TATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCT 3775471
Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032
| || || | ||| |||| ||| ||||| | ||| || | ||||||||
Sbjct 3775470 GATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGG 3775411
Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTA 214092
|||||| ||||| || || || ||||| | || | | |||| || || || || |
Sbjct 3775410 TTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGA 3775351
Query 214093 TGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCA 214152
| || ||||| ||||||| |||| || ||| | | || || ||||||| | |
Sbjct 3775350 TACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGA 3775291
Query 214153 TGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAG 214212
|| ||| || | | ||| | | ||| || ||| | ||| ||| || | || |
Sbjct 3775290 TGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGG 3775231
Query 214213 AGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCT 214272
|||| | || |||||| || || | | |||| | ||| | |||||||||
Sbjct 3775230 CGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGTCT 3775171
Query 214273 CCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCT 214332
| | | | || |||| || |||||| | || | | ||| | ||| || |
Sbjct 3775170 CAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTT 3775111
Query 214333 GGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCT 214389
|||| | || | | | || ||| | | |||||||| | |||||||| ||||
Sbjct 3775110 GGGGTCGCTCGGCAACAGCACCGTTGACTCGC---AGCAGGTATGCTCGCTCCAGGGTCT 3775054
Query 214390 TGAACCCAAAGTAGGAGTAGGT 214411
|||| ||||||||| ||||||
Sbjct 3775053 TGAAGCCAAAGTAGTTGTAGGT 3775032
>seq2
Length=3052417
Score = 318 bits (352), Expect = 1e-81
Identities = 515/733 (70%), Gaps = 11/733 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| ||||| ||||| || ||||| ||||| || ||| |||||||||||
Sbjct 506594 CTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTC 506653
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCC--GTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | |||||||||| | || | || | | |||
Sbjct 506654 CATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTA--CCGAGAGCAACTAGC 506711
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| | || ||||| |||||||||| | |||| || || |||||| || | ||
Sbjct 506712 AGACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGA 506771
Query 48017 GACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
||| ||||| ||| | || || ||||||| ||| || || || || | | |
Sbjct 506772 C-CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGAC 506830
Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
| || ||| || ||||||| ||| |||||| | | |||| ||||||
Sbjct 506831 GTCCTCAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAA---AGCAGGCAGGC 506887
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
|||||| |||||| || ||||| ||| ||||||| ||||||||||| ||| |||||
Sbjct 506888 AAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGG 506947
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||||| || | || ||||||||||| || | ||||||||||| ||||||||||||||
Sbjct 506948 CATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCC 507007
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT-GTCTGAGATCC 48314
||| || || || || || |||| | |||||| |||| | |||| ||| |||||||
Sbjct 507008 CTCGACGGCGGCAAAGGCAATGAGTCGCTCTCC-AAAGGTGGACTCTTCGTCGGAGATCC 507066
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374
| || |||||||| ||||| ||||||||||| || || ||||| ||||| ||| |
Sbjct 507067 ACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACA 507126
Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | ||| | |||| | || || || |||| | ||| |||| |
Sbjct 507127 GGTAGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGG 507186
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | ||||||| ||||||
Sbjct 507187 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCA 507246
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || |||||||| ||| | ||| ||||| || || || || || || ||||||||||
Sbjct 507247 CCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGA 507306
Query 48555 AGGCAAGGACATG 48567
| || || || ||
Sbjct 507307 ATGCGAGAACGTG 507319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532462319360
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