Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 264 2e-65
seq6 260 3e-64
>seq2
Length=3052417
Score = 264 bits (292), Expect = 2e-65
Identities = 574/858 (67%), Gaps = 20/858 (2%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| |||||||||||||||| | ||| |||||| || || |||||||||
Sbjct 507442 GAAATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGAT 507383
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|| | |||||||||| | |||| | | ||| |||| ||| || |||
Sbjct 507382 CTTGGAAAGGACATGGGTGACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATC 507323
Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
| |||| | ||||||||||| ||||| || ||||| || |||||||| ||| |||
Sbjct 507322 TCCCACGTTCTCGCATTCTTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAG 507263
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
||||| || | || |||||| | ||||||||||| |||||||| ||||||||
Sbjct 507262 CGATTCTCCGGCGAGGTGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATG 507203
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767
|| || || | ||||| ||| || | ||| ||||| || ||||| | |||
Sbjct 507202 ATGGAGAACATCCACTCCGAGACCTACTC---GCTGCTGATCGACACATACATCAAGGAC 507146
Query 25768 GTCGCCGAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825
| | |||| || | ||||| ||||||||| ||| ||| ||||||||| |
Sbjct 507145 --CCCAAAGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAA 507088
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTG 25884
|||| |||||| | ||||||||| | | | || | | || ||||| ||||| ||
Sbjct 507087 AGGCCGACTGGGCCCTCAAGTGGATCTCCGACGA-AGAGTCCACCTTTGGAGAGCGACTC 507029
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||||||| || || ||||||||||| ||| ||| || || || |||||||||||
Sbjct 507028 ATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGG 506969
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || |||||| || || ||| ||||||||||||||| | | |||
Sbjct 506968 CTCAAGAAGCGAGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 506909
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
|||||||| |||| || |||||||||||||| | | || ||| | || |||
Sbjct 506908 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCTCG---CACCTTGAGAACCGACCC 506852
Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124
|| | ||| || | |||| |||||||| | |||||| ||||||| |
Sbjct 506851 TCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTT 506792
Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184
| || |||||| || || ||| |||| |||||
Sbjct 506791 ACTGACGCTCTGCCCTGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATC 506732
Query 26185 GAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243
|||| ||| || |||| |||||| || | || || | ||| | || | | |
Sbjct 506731 GAGTTTGTCGCTGACCGTCTGCTAGTTGC-TCTCGGTAACTCCAAGGTGTATAACTCCAC 506673
Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303
||||| |||||||| ||||| ||||| || ||| || ||||||||||| || || ||
Sbjct 506672 CAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAA 506613
Query 26304 GAGGGTCGGCGACTATCA 26321
| | || |||||| ||
Sbjct 506612 GCGAGTGTCCGACTACCA 506595
>seq6
Length=3777980
Score = 260 bits (288), Expect = 3e-64
Identities = 936/1444 (65%), Gaps = 31/1444 (2%)
Strand=Plus/Minus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486
|||||||||||||||| |||||| ||||||| |||||||||| || || |
Sbjct 3776229 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCAAATG 3776170
Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546
| | || || | ||| ||||||||| ||||| || || | | | ||||| | ||
Sbjct 3776169 GGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAGAGCAATGGGTCGGT 3776110
Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
||| | |||| || || || || || || || |||| |||||| | | ||
Sbjct 3776109 GTCGCATGTTAGACTTCTTGGCCTCGGGGACCGGGTAGTAGTTTCGGTCGATGATAGCGT 3776050
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
||||||| | ||||| || | | ||| |||||||| | | | | | | | |
Sbjct 3776049 TGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGAAGTCGTAGAACGAGT 3775990
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
| | |||| | ||| ||||||| | || || | | |||||||| || |
Sbjct 3775989 TGGTGTCGTC-TCGAGTA-----ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGA 3775936
Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786
| || ||||| || | |||| || ||||| || ||||| |||| |
Sbjct 3775935 CAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTAGAAGACTTAA 3775876
Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846
| || || |||| || || || ||||| || ||| | ||||||||| ||||| ||||
Sbjct 3775875 TTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGG 3775816
Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCACC 221905
| ||| | ||| ||| | ||||| | || ||| || | ||||| | |
Sbjct 3775815 GGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT-TCTGGGCAGGGATG 3775757
Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965
|| | | || ||||| ||| | | | || || ||| | ||||| |||
Sbjct 3775756 GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCG---TACAGCTGCTTAAACTCATCA 3775700
Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025
|| || | ||||| || || || ||| | ||| |||||||| |||| | |||
Sbjct 3775699 CCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTC 3775640
Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085
| | ||| | || |||||| ||||| ||||||||||| ||| | || || |||| ||
Sbjct 3775639 TGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCT 3775580
Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145
|| ||| ||| |||| ||| || | ||| || | ||||| || || || |||||
Sbjct 3775579 CGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGC 3775520
Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC-AT 222204
|| ||||| || || | || | || || |||||||||||||| |||||||| || ||
Sbjct 3775519 CAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTAT 3775460
Query 222205 CCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | | | ||| ||| || || | || || | |||||||| ||||| |
Sbjct 3775459 CGGG--CGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAG 3775402
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGG 222323
| || |||||| | || || | | ||| | ||||| |||||||| ||||
Sbjct 3775401 TTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGG 3775342
Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383
| || || |||| || ||| | ||||| || || |||||| || || ||||| |
Sbjct 3775341 CAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGT 3775282
Query 222384 CCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACA 222443
|||| | ||| | || ||||| ||||||||||||| | || | | |||||| | |
Sbjct 3775281 CCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGA 3775222
Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTC 222503
| ||||| ||||| || ||||| | |||||| | ||| ||||| | | | |
Sbjct 3775221 GAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCC 3775162
Query 222504 TGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT 222563
||| |||||||| ||||| || | | | || |||| ||| | ||||| | ||
Sbjct 3775161 GGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCT 3775102
Query 222564 ---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
| |||| ||| ||| || | |||||||| | | ||||| |||||||| ||||
Sbjct 3775101 CGGCAACAGCACCGTTG--ACTCG-CAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAA 3775045
Query 222621 AGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGAC-TTG 222676
|||||||| |||| ||||||| | ||| | | |||| ||| ||||| || | |||
Sbjct 3775044 AGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCGCCGTTGAGCTCGTCGGCGTTG 3774986
Query 222677 TGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCG 222736
|| ||| | ||| | | || || || | ||| | || || ||| | |
Sbjct 3774985 GCCTGCACGGT---GTCGTACAGCTCCTTGGAGACCATGGGCGAGTGCTTCTTGTTTCGG 3774929
Query 222737 GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTT 222795
||||| |||| |||||||| | | | | | |||||| | || | ||||||||
Sbjct 3774928 GGGTTCACGTAGTGGTACAAGTCGTAAACCACCTGCGAGAACTGCTTCTTG-GTCTGCTT 3774870
Query 222796 GTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGT 222855
||||| || ||||| ||||| || | |||| || |||||||||| |||| |||||
Sbjct 3774869 ATGCAGGTTGGACACAGCGATTCGGGCAGCCAGAATCGCATAGTCAGGATGCAGAGTGGT 3774810
Query 222856 CATG 222859
||||
Sbjct 3774809 CATG 3774806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844463293760
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