Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 152 5e-32
seq6 118 1e-21
>seq4
Length=3654803
Score = 152 bits (168), Expect = 5e-32
Identities = 498/764 (65%), Gaps = 16/764 (2%)
Strand=Plus/Plus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || |||||||||| || |||| ||| || || ||||||||||||||||| ||
Sbjct 396790 TTTGTCCACAGTAAACTGGATAGCATGAGCAGCAGGCGGAGTTCTCAGATAATACATGCC 396849
Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTA----ACGCGTAAG 138268
||||| | ||| | |||| | | | || || | |||| | | ||||||
Sbjct 396850 TGTTTTAAGTCCAGCCTTCCAGCCATGGAAATGCATGGCTGTGATTTTTCCATGCGTAA- 396908
Query 138269 TCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAG-CGCCTCGATCA 138327
|| | | || || ||||||| ||| || || || ||| | | |||| || ||
Sbjct 396909 TC---TCAGGCATGAAAATGTTAAGCGACTGGGATTGGTCAATGTAGGGCGCC-CGTGCA 396964
Query 138328 ATGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGA 138387
||||| | ||| | ||| || || |||||| | || |||| | | ||
Sbjct 396965 GCAGCCATATCAATGATATTACGGGCCTTGATTTCCCACGCAGTTCTGTACACGGCTCGG 397024
Query 138388 ATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447
|| ||| ||||| | || | || || |||||| | ||||||||| |||
Sbjct 397025 ATGTGTTCGGGTATCTGGGTGATGCTCTGGATCGAGCCGTTGTCGTGAATGATGCGGTTT 397084
Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507
|||| || ||| | ||| || ||||| | || || ||||| | ||| |
Sbjct 397085 TTCATCTCCTCGGTCCACATGCCCAGTTTGATTAGATCTTTCATCAGCCACTGGTTCACC 397144
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
|| |||| ||||| ||| || ||||||| |||||||||| ||| | || || ||
Sbjct 397145 ACGAGAAACTCACCAGCCTGGACCCGACGAAGGTAAATGTTGGACGTGTACGGTTCGAAA 397204
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
| ||||||| ||||||||||| | |||| || || |||||| || || | |||
Sbjct 397205 CACTCGTTGTGGCCCAGAATCTGCGATGTGGAAGCTGTAGGCATGGGGGCAACAAGTAGA 397264
Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGA-GCGACGACCAGTCCCACAAA 138684
|| || || | |||||| || | || || ||||| |||| | ||| ||||| | |
Sbjct 397265 GAGTTTCGCATACCGTGTTTGGCGAGCTTGGT--CTTGAGGCGA-GCCCAATCCCAGAGA 397321
Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744
|| ||| | |||||||||| ||| |||| | | ||||| ||| ||||||||||||
Sbjct 397322 TCCGACGGTGTCTTGTTCCACAGATCAAACTGCAGCTTTCCCTGACTGGCGGGACTGCCT 397381
Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804
|| || | || || || || || |||| |||| | ||||| || ||
Sbjct 397382 TCATAGGTCTCATAGGGTCCCAATTCAGCGGCCAGCTCGATAGATGCCTCACAGGCTGCA 397441
Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864
| |||||| ||||| || | ||| | | | ||||||| ||| ||| | |||
Sbjct 397442 TGGTAAATGGTTTCAAAGATGAGAACATTCAACTCTGCAGCCTCGGGGCTGTCGAAGGGC 397501
Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCAC 138908
|| || ||| || | ||| |||| ||||| || || || |||||
Sbjct 397502 ATTCGTAGCTTCATAAACACGTCAGCCAGGCCCTGAACACCCAC 397545
>seq6
Length=3777980
Score = 118 bits (130), Expect = 1e-21
Identities = 455/712 (64%), Gaps = 11/712 (2%)
Strand=Plus/Minus
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
|||||||| ||||| || | | || ||||| ||| |||| |||| || | ||
Sbjct 3775733 CTCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCA 3775674
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| || || ||||| || | |||| | ||||| || ||| ||| ||||||||| ||
Sbjct 3775673 CTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTC 3775614
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481
|| ||||||| ||| | | || || || || | |||||| || |||
Sbjct 3775613 GGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTT 3775554
Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541
| || | ||| || || | || ||||||| || || || || || || | ||
Sbjct 3775553 TCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGC 3775494
Query 139542 GCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598
|| || ||| || || ||||| |||| ||| | | || || | || ||||
Sbjct 3775493 ACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAG 3775434
Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAG 139654
||| ||| | | |||| | | |||||||| || | | ||| ||| | || ||
Sbjct 3775433 CATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGT----AG 3775378
Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAAT 139714
|||||| || || | | | ||||| |||||| || | ||||| || | | | ||
Sbjct 3775377 CTCGGATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGG 3775318
Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774
| || ||||| || || ||| |||||||| ||| |||| || || || |
Sbjct 3775317 TTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACG 3775258
Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834
|||| | || || | || ||||| | ||||| || ||||| |||||
Sbjct 3775257 ACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGT 3775198
Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894
| | ||||| | | ||| || || ||||| | |||| | ||||||||||
Sbjct 3775197 ACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATAC 3775138
Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954
|||||||||||||||| | ||| |||||| || ||||| || || || | || |
Sbjct 3775137 CGACAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCA 3775078
Query 139955 tCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||| || | ||| ||||||||| |||||||||| | ||| |||| ||
Sbjct 3775077 GCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTC 3775026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897436912120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |