Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 221 2e-51
seq6 143 4e-28
seq1 109 9e-18
>seq2
Length=3052417
Score = 221 bits (244), Expect = 2e-51
Identities = 250/332 (75%), Gaps = 5/332 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||| | |||||| ||| |||||| |||||||| || |||||
Sbjct 506903 ACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTT 506962
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| |||| ||| ||||| |||||||||||||||||||||||
Sbjct 506963 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAA 507022
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | | ||| ||||| |||| ||| | | || | | ||||||||| | |||||
Sbjct 507023 GGCAATGAGTCGCTCTCCAAAGGTGGACT---CTTCGTCGGAGATCCACTTGAGGGCCCA 507079
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578
|| ||||||||| | | |||| | || ||||||||| || |||| ||| | ||
Sbjct 507080 GTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG-CT 507138
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| |||||||||| ||| |||||||| || |||||||||||||| ||||||||||| |
Sbjct 507139 CTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCT 507198
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670
| || |||||||||||| || ||||| |||
Sbjct 507199 CCATCATGATCTGGAAGCCGTAGAAGCACTTG 507230
Score = 123 bits (136), Expect = 4e-22
Identities = 195/279 (70%), Gaps = 3/279 (1%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| ||| |||||||||| | || ||||| ||| || | ||||||||||
Sbjct 507222 AAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTA 507281
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
||||| |||||| ||| || || || ||||| ||||| ||| ||| ||||| |||
Sbjct 507282 ACGATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGAAGAACCGCTCATCG 507341
Query 796261 TCGCTGAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317
| | |||| | |||||| || |||| || || || | |||||| || |||
Sbjct 507342 TTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCTTTCCAAGATCAATCTCCTCAGCTGTC 507401
Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAAC 796377
|| || |||||||||||||| |||||||||| ||| || ||||| ||||||||||
Sbjct 507402 CAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATTTCGTGGTACTGGATGGGGAAG 507461
Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416
|| ||||| || ||||||| ||||| ||||||
Sbjct 507462 AGCACAAACCGTCGATGGTTCTCCTTGAGCAGAGGCTCG 507500
Score = 95.1 bits (104), Expect = 2e-13
Identities = 176/253 (70%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||| ||| ||| ||||||||||||||||||||| | |
Sbjct 506581 TGACACCGGCCTTCTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCA 506640
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCAC---C 794007
| ||||| |||||| | ||| ||||||| | || || | | || | | |
Sbjct 506641 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGG--AGTTA-TACACCTTGGAGTTAC 506697
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
|||| | | ||||| ||||| ||||| || || |||||||||||||| || |||||
Sbjct 506698 CGAGAGCAACTAGCAGACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGT 506757
Query 794068 TCATGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126
|||| || | || |||| |||||| | || | | ||||| | |||||| | ||
Sbjct 506758 TCATACCAAGCAG-ACCACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACA 506816
Query 794127 GCCTCGATGATGA 794139
||||||| ||||
Sbjct 506817 GCCTCGACAATGA 506829
>seq6
Length=3777980
Score = 143 bits (158), Expect = 4e-28
Identities = 325/489 (66%), Gaps = 15/489 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| || || || || || |||| |||| |||| || ||||||||||| | ||||||||
Sbjct 3775472 CTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGA 3775413
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||| || || || | ||||| ||| | || || | ||||| | | ||
Sbjct 3775412 GGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACC 3775353
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| |||||||| | |||||| || || || || |||| || || ||||||||||| ||
Sbjct 3775352 GATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTC 3775293
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||||| ||||||||| | || || |||||||| | || || | | || ||
Sbjct 3775292 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCC 3775233
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||| ||| |||| ||||| | || ||| | ||| || ||||| | ||||||
Sbjct 3775232 GGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGT 3775173
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | | || || | | || |||| || | | |||| | |||
Sbjct 3775172 CTCAATGGCCCGGGCAA-----TGTT----GTCG------CCGTGGATACCGACAGAGAC 3775128
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||| | |||||||||||| | || || || || |||||| |
Sbjct 3775127 TCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGC 3775068
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| ||||||| | ||||||||| ||||| | ||| || |||| | | |||||
Sbjct 3775067 TCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGC 3775008
Query 2074020 GGCGTCGAG 2074028
| ||| |||
Sbjct 3775007 GCCGTTGAG 3774999
>seq1
Length=2339597
Score = 109 bits (120), Expect = 9e-18
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| |||||| | || || |||| || ||||| |||||||||||||| || || ||||
Sbjct 1196335 CTGTTTGAGATTATTCTGACCGCAAATTACCTGGACATCAAGCCCCTGCTGGACGTGGGC 1196276
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| ||||||||| | |||||||||||| | |||||||| || || |||||
Sbjct 1196275 TGCAAGACGGTGGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTC 1196216
Query 2035749 AACAT 2035753
|||||
Sbjct 1196215 AACAT 1196211
Score = 107 bits (118), Expect = 3e-17
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 1485504 GGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGT 1485563
||||||| |||| || || ||| | | || || || || |||||||||||||| || |
Sbjct 993702 GGCGTGCTTGGCGAGCTCACCGGGGAGAATGAGTCGGACAGCGGTCTGGATCTCTCGAGA 993643
Query 1485564 GCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTC 1485623
||| ||| |||| | | ||||| | |||||||||| ||| || ||
Sbjct 993642 AGTGATGGTGGACTTCTTGGTGTAGGTGGCCAGCTTGGAGGCCTCGGTGGCGACTCGCTC 993583
Query 1485624 GATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTC 1485683
| |||||||||||||| ||||||||||| ||||| | | | ||||||| || |||
Sbjct 993582 AAAGATGTCGTTGACAAAGGAGTTCATGATAGACATGGCTCGGGTGGAGATACCAGTGTC 993523
Query 1485684 GGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||||| |||||| |||||||||||
Sbjct 993522 AGGGTGGGTCTGCTTCAGCACCTTGTA 993496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916243315137731
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