Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 8e-21
seq5 93.3 3e-14
>seq6
Length=3777980
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| || || | ||| ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 1363887 CAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTC 1363828
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| ||||| |||||||| | || | |||||||||||
Sbjct 1363827 CTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 1363768
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || || | ||| || ||
Sbjct 1363767 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGT 1363708
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || |||||||| ||||| ||||||||
Sbjct 1363707 CTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1363675
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 1245196 CAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTC 1245137
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| ||||| |||||||| | || | |||||||||||
Sbjct 1245136 CTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 1245077
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | ||| || ||| || || | ||| || ||
Sbjct 1245076 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGT 1245017
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976
||| || || |||||||| |||||||| ||||
Sbjct 1245016 CTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1244985
>seq5
Length=4047401
Score = 93.3 bits (102), Expect = 3e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || ||| | || |||| || || ||||| ||||||||
Sbjct 2184026 CTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAA 2183967
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||||||| |||||||| | || | |||||||||||
Sbjct 2183966 AATCAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTC 2183928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692684887951
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |