Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq6 251 7e-62
seq2 161 1e-34
seq5 109 5e-19
>seq6
Length=3777980
Score = 251 bits (278), Expect = 7e-62
Identities = 1187/1861 (64%), Gaps = 57/1861 (3%)
Strand=Plus/Minus
Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010
|| ||||| |||||||| || |||||||| ||| | ||| ||||| ||||| ||
Sbjct 3776839 GTTCGCAGGTAGTACATACCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAG 3776780
Query 148011 GACATGAGCGTGTAC---GTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCA 148067
| ||||| || | || |||| | | | || | ||||| |||||||
Sbjct 3776779 G---TGAGCTTGCCCATGGTAGGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCA 3776723
Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127
||||| | | |||||||||||||| ||||||| |||||| |||||||| |
Sbjct 3776722 ATGAAGGGGGATCGGTCAGCGGCCATCTCAATGATTCGCTTCTGAGAAATCTCCCACACG 3776663
Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187
||||||||||| |||||| | | ||||||| | |||| |||||| || ||| |
Sbjct 3776662 GTCTTGTACAGGTCCTTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGATCCGTTG 3776603
Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247
| |||| ||| | || ||| || | | ||| | ||| | |||||| | |
Sbjct 3776602 TCAGCAACAATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCTCAACCAGGTCCTTG 3776543
Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTT 148306
| ||| | | || || | ||| || || || || || || || || ||| || | |||
Sbjct 3776542 AGCAGCCAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCG-AGAGTAAATGTT 3776484
Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366
| || | || || || |||| ||| || | |||||| | || | || |||||
Sbjct 3776483 GGAAGTGTAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGG 3776424
Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426
|||| || |||| ||||||||| |||| ||| || | || ||| ||| ||| |
Sbjct 3776423 CATGGGAGCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATC 3776364
Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486
|||| ||||| ||| || || ||||||||||| | ||| |||| || ||
Sbjct 3776363 GTCCCACTCCCACAGCTCGGAAGGAGTCACGTTCCAGAGATCGAACTGGAGGTCACCCTT 3776304
Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546
| || ||| ||||| | | | ||| | |||| | | |||| ||| |
Sbjct 3776303 GGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGA 3776244
Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGA 148606
|| |||| || |||| ||| || |||||| || || |||||||| | |||
Sbjct 3776243 GGCTTCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 3776184
Query 148607 CTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCAC 148666
|||| || | || | || || || || | |||||| || ||||| || ||||
Sbjct 3776183 CTCGGACTCAAATGGGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAG 3776124
Query 148667 GCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC-TCGAGCGGATAGTGGTTGC 148725
||||||| |||||| ||||| || | | ||| || ||| |||| ||| |
Sbjct 3776123 AGCAATGGGTCGGTGTCGCATGTTAGA-CTTCTTGGCCTCGGGGACCGGGTAGTAGTTTC 3776065
Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAA 148785
|||||||||| || || || ||||| | ||||| | ||| | ||||| | |
Sbjct 3776064 GGTCGATGATAGCGTTGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGA 3776005
Query 148786 AATCGTA---------CTTGTCATCTACGA--TGCATCGGT--TCACGGCGATAGAGGCT 148832
| ||||| |||| ||| ||| || || || ||||| || ||
Sbjct 3776004 AGTCGTAGAACGAGTTGGTGTCGTCT-CGAGTAACAAAAGTGGGCAGAGCGATGGAAGCC 3775946
Query 148833 AGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG 148892
|| ||||| || || |||||| || | ||||||||| ||||| |||||| ||
Sbjct 3775945 AGGTTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTA 3775886
Query 148893 CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTAC 148952
| || || || | |||||| || ||| ||| | |||||| | ||||||||||
Sbjct 3775885 GAAGACTTAATTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAC 3775826
Query 148953 AGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCC 149009
|||||| | || ||| | || ||| || | || | ||| ||| | |
Sbjct 3775825 AGCATGAAGGGGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACC---ACAGCTTC 3775769
Query 149010 TGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065
|| || | | || | |||| | || ||||||| |||||| |||||| |
Sbjct 3775768 TGGGCAGGGA--TG--GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTG 3775713
Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125
|| ||| | || || ||| ||||| ||||||||||||| || |||||||| || |
Sbjct 3775712 CTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGT 3775653
Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185
||| | ||| | | || |||| ||| ||||| ||||| | ||| || || |
Sbjct 3775652 CCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAA 3775593
Query 149186 GAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTG-AGCACGCTG 149243
||||| || | || | | ||||| || ||| ||||| | | || || | |
Sbjct 3775592 CAGGTCTCG-GGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTC-G 3775535
Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCG 149300
|| || || ||||||| ||||||| ||||| || | || || ||| |||||
Sbjct 3775534 AAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCT 3775475
Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360
||||| || |||| || | |||||||| | || || | ||| || | || || ||
Sbjct 3775474 CCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTG 3775415
Query 149361 GCAGTGCCGTTAG-TAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419
| || ||||||| | ||| |||| ||| ||||| | ||||| | | |||
Sbjct 3775414 GAGGTTCCGTTAGTTCCAGC-AATGTAGGAGCCAGTAGCTCGGATGTTGTGGA--TAGAC 3775358
Query 149420 --GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATG 149477
||||| |||||| | |||| || || || ||| ||| || |||||||
Sbjct 3775357 AGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATG 3775298
Query 149478 CCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGC 149537
|| |||||| |||| ||||||| | | || || ||||| |||| || || |
Sbjct 3775297 CCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGA 3775238
Query 149538 GTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCG 149597
|| ||||| | | | |||||| ||||| || || || ||||| ||| | |
Sbjct 3775237 GTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTG 3775178
Query 149598 TACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGC 149657
|| | ||| | | ||| | |||| ||||| ||||| || | | ||| ||||| | |
Sbjct 3775177 TAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATC 3775118
Query 149658 ATATGCTGCGGTCGCTCCGCCA---CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714
|| || || |||||||| || | | ||| | | |||| ||| | ||
Sbjct 3775117 ATCTGTTGGGGTCGCTCGGCAACAGCACCGTT---GACTCGCAGCAGGTATGCTCGCTCC 3775061
Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCG 149774
|| |||||| |||||||||| |||||| ||||| ||| ||| | ||||||| ||| |
Sbjct 3775060 AGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGCGCCGTTG 3775001
Query 149775 A 149775
|
Sbjct 3775000 A 3775000
Score = 120 bits (132), Expect = 3e-22
Identities = 154/209 (74%), Gaps = 5/209 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| ||| | || || || |||||||||||||| |
Sbjct 1245180 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG--TCCTCGAGCTGCTTAC 1245123
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || ||||| || |||||||| |||||| ||
Sbjct 1245122 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACT 1245063
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| | || |||||| |||| ||||| || ||||| || || |
Sbjct 1245062 TGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGGG 1245003
Query 133642 TTTTTACGAAAATCTGCA-TGGCTTATTT 133669
| || || || || |||| ||| ||| ||
Sbjct 1245002 TCTTGACAAAGATTTGCACTGGGTTAGTT 1244974
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| || | || || || |||||||||||||| |
Sbjct 1363871 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG--TCCTCGAGCTGCTTAC 1363814
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || || || || |||||||| |||||| ||
Sbjct 1363813 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACT 1363754
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || || ||||| || |
Sbjct 1363753 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCGGTAAGGG 1363694
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || |||||||||||
Sbjct 1363693 TCTTGACAAAAATCTGCAT 1363675
>seq2
Length=3052417
Score = 161 bits (178), Expect = 1e-34
Identities = 368/545 (68%), Gaps = 19/545 (3%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||| || || ||||| |||||||| || ||||| ||| || ||||| |
Sbjct 506594 CTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTC 506653
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | | |||| | || | | || | || |||||
Sbjct 506654 CATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAG 506713
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || |||||||| ||||||| |||||| || |||||||| || |||| |
Sbjct 506714 ACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGA-C 506772
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
||| || | || | || | ||||||| ||| ||| | || ||||| || |||
Sbjct 506773 CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTC---GACAATGA 506829
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGT--GTTCGATGCGC---GTTCGGTAGTA-CAGGC 120643
|| | | | | |||| | ||| | | | || || | | |||||
Sbjct 506830 CGTCCTCAA------CAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGC 506883
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| |||||||| |||||||| |||||||| || || || ||||||||| || || ||||
Sbjct 506884 AGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGC 506943
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
| ||||||| ||| | |||||| |||| |||| ||| || ||| || ||||| |
Sbjct 506944 CAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGA 507003
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCG 120822
|||||| ||| ||||||||| | | ||||| | || || | | |||| | | |
Sbjct 507004 TGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGAC-TCTTCGTCGGAG 507062
Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTC 120882
|||||||| | |||||| ||||||||||| | ||| || || ||||| |||||
Sbjct 507063 ATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 507122
Query 120883 AGCAG 120887
| |||
Sbjct 507123 AACAG 507127
>seq5
Length=4047401
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|||||||||||||| || || |||| || ||||||||||| || || || || ||||||
Sbjct 2184217 TCCTCGAGCTGCTTACCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 2184158
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||| ||||| | |||| ||||| | | ||| || |||| |||| |
Sbjct 2184157 TCCTGAATCTTGGACTTGACATTATCAATAGTGTCAGAAGACTCAACCTCGAGAGTGATG 2184098
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || |||||||| || ||||||||||||||
Sbjct 2184097 GTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 2184063
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535
|| |||||||| ||||||||||| |||| || |||||||||||| || |||||| |||
Sbjct 1464521 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1464462
Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595
||||||||| | || ||||||| | |||| || | | | || ||||| ||||||
Sbjct 1464461 TTCAACCCCTTCAAGAAGAACCACGGTGGTCCCACCGACTCTGAGCGACACGTTGGTGAC 1464402
Query 116596 CTGGGCAAC 116604
|| || |||
Sbjct 1464401 CTCGGAAAC 1464393
Score = 84.2 bits (92), Expect = 2e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || || || | | | |||||||||||||| ||
Sbjct 2184031 GTGGACTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGGCCA-TCCTCGAGCTGCTTACC 2183973
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| ||||| || || |||||||| ||||| |||
Sbjct 2183972 GGCGAAAATCAGTCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTT 2183913
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCAC 133612
|| | || | ||||||| || ||| ||
Sbjct 2183912 GACGTTGTCGATGGTGTCGGAGGACTCGAC 2183883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420624759960
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