Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 7e-25
>seq3
Length=3339761
Score = 129 bits (142), Expect = 7e-25
Identities = 464/717 (65%), Gaps = 23/717 (3%)
Strand=Plus/Minus
Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACC 146862
|| || | ||| |||||||| |||| || || ||||| |||| ||||||| |
Sbjct 1502402 TGGGGCTTGTATCCCTCGAGCACAAAGTCCTCGTAGTTGAAACCGTCAATGTCCTTGATA 1502343
Query 146863 -CGCCT-CAAAATCTTGAGCTTGGGGAAG-GGTCGGGGGTTCCTGGCCAGCTGAATTTTC 146919
| | | ||||| ||||||||||||| || | || |||| | | | ||| ||
Sbjct 1502342 TCTCGTGCAAAAG--TGAGCTTGGGGAACTGGCCTGGCGTTCGAG-CAATCTGCTGCTTG 1502286
Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979
|| | |||||||| | ||| || || ||||| |||| |||||| | | || ||
Sbjct 1502285 AGTGCGTCCACGTGATCCTTGTACACATGGGCGTCTCCCATGGTGTGAATGAGCTCTCCA 1502226
Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039
| | |||| || ||||| | ||| ||||||||| | |||| ||| ||||||
Sbjct 1502225 CAGTCCAAATCGGTGACCTGGGCAATCATTCGGGTGAGCAGAGCGTAGGAGGCAATGTTG 1502166
Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC--TCCC 147097
|||||||| || || |||| ||| | || | ||| |||||||| ||||| || |||
Sbjct 1502165 AAGGGGACTCCAAGACCCAGGTCACATGATCGCTGATACAGCTGACACGACAGACGTCCT 1502106
Query 147098 CGT--CG-----------GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCC 147144
||| || | ||| ||||||||||| | ||||| || || || ||||||
Sbjct 1502105 CGTTCCGAGTTTTTGTACGACACATAAAACTGGCAAAACATGTGACAGGGAGGAAGCGCC 1502046
Query 147145 ATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204
|| || || || ||||||||||| || || | | | || | | | |||||
Sbjct 1502045 ATCTTTGGGAGATCGGCGGGGTTCCATGCAGACAGAATGATTCGACGGTCGTGAGGGTTG 1501986
Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264
| | | | || ||| | |||||||||||||| ||||| ||| | ||
Sbjct 1501985 GTTCTGAGAGTGTGTATCACCTGTTTGAGCTGGTCCACGCCTTGGCCAGTGTAATCCGTG 1501926
Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324
| || | | |||| ||| || || || | ||| |||||||| || || || ||||||
Sbjct 1501925 TCACAATTCTTGTACTCGGCTCCGAAATGGCGCCATTGGAAGCCATAGACCGGTCCCAGG 1501866
Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGC 147383
|| || |||||| | |||||| || || || ||||| || || | |
Sbjct 1501865 TCTCCCTCTCGTCTGTG-GCCCAGCCCGGCCTTTTCCAGGAACTCCTTAGATCCATTTCC 1501807
Query 147384 GTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAA 147443
|||||||||| | || || || | || ||| ||| | || | ||
Sbjct 1501806 GTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTTTTGCCGTCGGTGCATCCAGCCACAAA 1501747
Query 147444 CCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500
||| | |||||||||| ||| || | | ||||| | ||||||||| ||||||||
Sbjct 1501746 CCACAAAAGCTCCTCCAGAACGCCTCGGTAGAAGACTCGCTTGGTGGTGAGCAGGGG 1501690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487788485600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |