Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3 129 7e-25 >seq3 Length=3339761 Score = 129 bits (142), Expect = 7e-25 Identities = 464/717 (65%), Gaps = 23/717 (3%) Strand=Plus/Minus Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACC 146862 || || | ||| |||||||| |||| || || ||||| |||| ||||||| | Sbjct 1502402 TGGGGCTTGTATCCCTCGAGCACAAAGTCCTCGTAGTTGAAACCGTCAATGTCCTTGATA 1502343 Query 146863 -CGCCT-CAAAATCTTGAGCTTGGGGAAG-GGTCGGGGGTTCCTGGCCAGCTGAATTTTC 146919 | | | ||||| ||||||||||||| || | || |||| | | | ||| || Sbjct 1502342 TCTCGTGCAAAAG--TGAGCTTGGGGAACTGGCCTGGCGTTCGAG-CAATCTGCTGCTTG 1502286 Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || | |||||||| | ||| || || ||||| |||| |||||| | | || || Sbjct 1502285 AGTGCGTCCACGTGATCCTTGTACACATGGGCGTCTCCCATGGTGTGAATGAGCTCTCCA 1502226 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 | | |||| || ||||| | ||| ||||||||| | |||| ||| |||||| Sbjct 1502225 CAGTCCAAATCGGTGACCTGGGCAATCATTCGGGTGAGCAGAGCGTAGGAGGCAATGTTG 1502166 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC--TCCC 147097 |||||||| || || |||| ||| | || | ||| |||||||| ||||| || ||| Sbjct 1502165 AAGGGGACTCCAAGACCCAGGTCACATGATCGCTGATACAGCTGACACGACAGACGTCCT 1502106 Query 147098 CGT--CG-----------GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCC 147144 ||| || | ||| ||||||||||| | ||||| || || || |||||| Sbjct 1502105 CGTTCCGAGTTTTTGTACGACACATAAAACTGGCAAAACATGTGACAGGGAGGAAGCGCC 1502046 Query 147145 ATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204 || || || || ||||||||||| || || | | | || | | | ||||| Sbjct 1502045 ATCTTTGGGAGATCGGCGGGGTTCCATGCAGACAGAATGATTCGACGGTCGTGAGGGTTG 1501986 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | | | | || ||| | |||||||||||||| ||||| ||| | || Sbjct 1501985 GTTCTGAGAGTGTGTATCACCTGTTTGAGCTGGTCCACGCCTTGGCCAGTGTAATCCGTG 1501926 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 | || | | |||| ||| || || || | ||| |||||||| || || || |||||| Sbjct 1501925 TCACAATTCTTGTACTCGGCTCCGAAATGGCGCCATTGGAAGCCATAGACCGGTCCCAGG 1501866 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGC 147383 || || |||||| | |||||| || || || ||||| || || | | Sbjct 1501865 TCTCCCTCTCGTCTGTG-GCCCAGCCCGGCCTTTTCCAGGAACTCCTTAGATCCATTTCC 1501807 Query 147384 GTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAA 147443 |||||||||| | || || || | || ||| ||| | || | || Sbjct 1501806 GTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTTTTGCCGTCGGTGCATCCAGCCACAAA 1501747 Query 147444 CCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 ||| | |||||||||| ||| || | | ||||| | ||||||||| |||||||| Sbjct 1501746 CCACAAAAGCTCCTCCAGAACGCCTCGGTAGAAGACTCGCTTGGTGGTGAGCAGGGG 1501690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487788485600