Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 3e-22
>seq2
Length=3052417
Score = 122 bits (134), Expect = 3e-22
Identities = 401/607 (66%), Gaps = 21/607 (3%)
Strand=Plus/Minus
Query 443271 CGGTTCGTCTTGTTCCCCGTTCAGCATCCCGACATCTACGACATGTACAA-ACGACAAGT 443329
||||| || | |||||| | ||| | | ||| |||| | |||||||| | | | |
Sbjct 507472 CGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTACAAGAAGGCC-GA 507414
Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389
|||| || ||||| |||||||||||||| |||||| ||| || ||| | ||
Sbjct 507413 GGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGTGACTGGGA-GA 507355
Query 443390 AC-GACTATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCAC 443445
|| |||| | | |||| || ||||||| | | | | || ||||||||
Sbjct 507354 ACAGACTCAACAACGATGAGCGG---TTCTTCATCTCCCACGTTCTCGCATTCTTTGCTG 507298
Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505
| |||||||||||| ||||| ||||| ||| |||| || ||| | |
Sbjct 507297 CCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTGCAGGCCC 507238
Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565
|||||||| | |||||||| ||||| | ||||||||||| ||| ||||| ||
Sbjct 507237 CCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 507178
Query 443566 ACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCA 443624
|| | | ||||| | ||| || || || || | || |||| || | || |||
Sbjct 507177 ACTCGCTGCTGATCGACACA-TACATC--AAGGACCCCAAAGAGCGAACCTACCTGTTCA 507121
Query 443625 TCGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680
|| || ||||| || |||||| ||||| | |||||| ||||| ||
Sbjct 507120 ACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCAAGTGGATCT 507061
Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740
| |||| | | || || ||| | |||||||| | || ||||| | ||||| || |
Sbjct 507060 CCGACGA-AGAGTC-CACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCGAGGGCAT 507003
Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800
|| || |||| |||| ||||||||||||||| | || ||||| || || |||| |
Sbjct 507002 CTTCTTCTCCGGCT-CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTG 506944
Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860
| || ||||| ||||| || ||| || ||||||||| |||| ||||| ||||
Sbjct 506943 GCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACTTTGCCT 506884
Query 443861 GTCTTCT 443867
| || ||
Sbjct 506883 GCCTGCT 506877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335409833905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |