Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 122 3e-22 >seq2 Length=3052417 Score = 122 bits (134), Expect = 3e-22 Identities = 401/607 (66%), Gaps = 21/607 (3%) Strand=Plus/Minus Query 443271 CGGTTCGTCTTGTTCCCCGTTCAGCATCCCGACATCTACGACATGTACAA-ACGACAAGT 443329 ||||| || | |||||| | ||| | | ||| |||| | |||||||| | | | | Sbjct 507472 CGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTACAAGAAGGCC-GA 507414 Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 |||| || ||||| |||||||||||||| |||||| ||| || ||| | || Sbjct 507413 GGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGTGACTGGGA-GA 507355 Query 443390 AC-GACTATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCAC 443445 || |||| | | |||| || ||||||| | | | | || |||||||| Sbjct 507354 ACAGACTCAACAACGATGAGCGG---TTCTTCATCTCCCACGTTCTCGCATTCTTTGCTG 507298 Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505 | |||||||||||| ||||| ||||| ||| |||| || ||| | | Sbjct 507297 CCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTGCAGGCCC 507238 Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565 |||||||| | |||||||| ||||| | ||||||||||| ||| ||||| || Sbjct 507237 CCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 507178 Query 443566 ACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCA 443624 || | | ||||| | ||| || || || || | || |||| || | || ||| Sbjct 507177 ACTCGCTGCTGATCGACACA-TACATC--AAGGACCCCAAAGAGCGAACCTACCTGTTCA 507121 Query 443625 TCGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680 || || ||||| || |||||| ||||| | |||||| ||||| || Sbjct 507120 ACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCAAGTGGATCT 507061 Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740 | |||| | | || || ||| | |||||||| | || ||||| | ||||| || | Sbjct 507060 CCGACGA-AGAGTC-CACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCGAGGGCAT 507003 Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800 || || |||| |||| ||||||||||||||| | || ||||| || || |||| | Sbjct 507002 CTTCTTCTCCGGCT-CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTG 506944 Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860 | || ||||| ||||| || ||| || ||||||||| |||| ||||| |||| Sbjct 506943 GCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACTTTGCCT 506884 Query 443861 GTCTTCT 443867 | || || Sbjct 506883 GCCTGCT 506877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335409833905