Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 7e-38
>seq2
Length=3052417
Score = 172 bits (190), Expect = 7e-38
Identities = 352/516 (68%), Gaps = 8/516 (2%)
Strand=Plus/Plus
Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796
|| ||||||||||| ||||| ||||| ||| ||| ||| |||||||| || || ||
Sbjct 506607 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 506666
Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854
||||| | ||||| | | ||| | || | | | || ||||| || | ||
Sbjct 506667 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 506724
Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914
| |||| ||||||| ||||| || || ||||||||| | || ||| || || |
Sbjct 506725 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 506784
Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974
|||| | |||| ||| ||| ||| | ||||| || | || | | | || |||
Sbjct 506785 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 506844
Query 129975 CCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033
| | |||| || | ||| || | ||| || |||||| || ||| |||
Sbjct 506845 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGA 506903
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|||||||| ||||||||||| || || |||||| || || ||||||||||| ||||||
Sbjct 506904 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTC 506963
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153
|| | |||||| || | || ||||| ||||||||||| ||||| || || ||
Sbjct 506964 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAG 507023
Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212
|||| ||| ||||| |||||| | | ||| || | | |||||| | ||||| |
Sbjct 507024 GCAATGAGTCGCTCTCCAAAGGTG-GACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTC 507082
Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248
|||||||||| ||| || |||| ||||| ||| ||
Sbjct 507083 GGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 507118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434975817240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |