Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 172 7e-38 >seq2 Length=3052417 Score = 172 bits (190), Expect = 7e-38 Identities = 352/516 (68%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||||||||||| ||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 506607 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 506666 Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854 ||||| | ||||| | | ||| | || | | | || ||||| || | || Sbjct 506667 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 506724 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914 | |||| ||||||| ||||| || || ||||||||| | || ||| || || | Sbjct 506725 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 506784 Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974 |||| | |||| ||| ||| ||| | ||||| || | || | | | || ||| Sbjct 506785 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 506844 Query 129975 CCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033 | | |||| || | ||| || | ||| || |||||| || ||| ||| Sbjct 506845 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGA 506903 Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| ||||||||||| || || |||||| || || ||||||||||| |||||| Sbjct 506904 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTC 506963 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | || ||||| ||||||||||| ||||| || || || Sbjct 506964 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAG 507023 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212 |||| ||| ||||| |||||| | | ||| || | | |||||| | ||||| | Sbjct 507024 GCAATGAGTCGCTCTCCAAAGGTG-GACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTC 507082 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 |||||||||| ||| || |||| ||||| ||| || Sbjct 507083 GGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 507118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434975817240