Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 152 4e-32 >seq2 Length=3052417 Score = 152 bits (168), Expect = 4e-32 Identities = 558/868 (64%), Gaps = 7/868 (1%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| ||||| |||||||| ||||| || || || ||||| | | || || || Sbjct 506592 TTCTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTC 506651 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| || || || || || || | ||| || | || || ||||| || || Sbjct 506652 TCCATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCG-AGAGCAACTAG 506710 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 || |||||||| ||||| || || ||||||| ||| || | | ||| || |||| | Sbjct 506711 CAGACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAG 506770 Query 4436 TCTCACAGGT-AGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | |||||| || |||| || | ||||| || || || || || || || | Sbjct 506771 AC-CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGA 506829 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 || | | | | || || ||| || | | || || | | || |||| Sbjct 506830 CGTCCTCAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAA 506889 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 | ||| |||| ||| ||||||| | || || ||||| || || || | || |||| Sbjct 506890 AGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCA 506949 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | | ||||| ||| || ||||| || || | ||| || || || || ||||| ||||| | Sbjct 506950 TGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCT 507009 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATT 4734 | ||||||||||| || | | ||| || || | | ||| ||| ||||| | Sbjct 507010 CGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACT 507069 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 | | ||||||| || |||||||| | ||| || || || | || ||||| || | | Sbjct 507070 TGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGT 507129 Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 || || ||||| | || || ||||| || || || || | || || | Sbjct 507130 AGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGT 507189 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | || || || || ||||| || ||||| ||||| | || || | | || || | Sbjct 507190 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCT 507249 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 || | |||| || || | ||| ||||| || |||||||| ||| ||||| || | Sbjct 507250 CGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATG 507309 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCA 5031 | | ||| || || || ||| || | || || || ||| || | ||||| || Sbjct 507310 CGAGAACGTGGGAGATGAAGAACCGCTCATCGTTGTTGAGTCTGTTCTCCCAGTCACCCA 507369 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 || || | ||||| || ||| | ||||| || || || || || || ||||||| Sbjct 507370 TGTCCTTTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACA 507429 Query 5092 TAGACCAAATATCAGGATACTGAATCGG 5119 | ||| || || | ||||| || || Sbjct 507430 TCTGCCAGATTTCGTGGTACTGGATGGG 507457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049449064657