Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 2e-23
>seq6
Length=3777980
Score = 123 bits (136), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| |||| || || || || || ||| |||||| ||||||||||| |||
Sbjct 1245213 ATACCTCCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1245154
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| || |||| || |||||||| ||||| ||||| | |||||||| || |
Sbjct 1245153 GAAAGAGTT--CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCG 1245096
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| | | | |||||||| | ||| |
Sbjct 1245095 GGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACT 1245036
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
||||||| | || || ||||| || || |||||||| || ||||||||||
Sbjct 1245035 CCACCTCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1244985
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| |||| || || || || || ||| |||||| ||||||||||| || |
Sbjct 1363901 CCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1363842
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 1363841 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1363782
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||| | | | |||||||||| || ||||||
Sbjct 1363781 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1363722
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || || |||||||| || || || |||||
Sbjct 1363721 TCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1363675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990272765893
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |