Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 >seq6 Length=3777980 Score = 123 bits (136), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| |||| || || || || || ||| |||||| ||||||||||| ||| Sbjct 1245213 ATACCTCCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1245154 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| || |||| || |||||||| ||||| ||||| | |||||||| || | Sbjct 1245153 GAAAGAGTT--CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCG 1245096 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | | | |||||||| | ||| | Sbjct 1245095 GGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACT 1245036 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 ||||||| | || || ||||| || || |||||||| || |||||||||| Sbjct 1245035 CCACCTCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1244985 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||| |||| || || || || || ||| |||||| ||||||||||| || | Sbjct 1363901 CCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1363842 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || |||| || |||||||| ||||| ||||| | |||||||| || | || Sbjct 1363841 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1363782 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||| | | | |||||||||| || |||||| Sbjct 1363781 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1363722 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| || || |||||||| || || || ||||| Sbjct 1363721 TCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1363675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990272765893