Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
>seq2
Length=3044971
Score = 150 bits (166), Expect = 2e-31
Identities = 458/705 (65%), Gaps = 12/705 (2%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||||||||| || ||||| | ||||| || ||||||
Sbjct 506103 TGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCC 506162
Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795
||||| || || || || || | | | | || |||| || || | | | |
Sbjct 506163 ATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGA 506222
Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855
| || || ||||| || || || |||||||| | | | |||||| || | ||||
Sbjct 506223 CGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCA 506282
Query 16856 ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--TAC 16913
|| ||||| || || | || ||||| || |||| || || ||| | | |
Sbjct 506283 CAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCC 506342
Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973
| |||| | || || ||| | | ||| || || | ||| || || || |
Sbjct 506343 T--CAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGT 506400
Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033
| || | |||||||||| | ||| || ||||| || || || | || |||||
Sbjct 506401 CAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGA 506460
Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093
||||| ||||| | ||| || || | |||||| || || || ||||| || |||||||
Sbjct 506461 GACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGA 506520
Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153
||| ||||| || || | ||| || | | || | |||| || ||||| ||
Sbjct 506521 CGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGA 506580
Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAAT 17209
| |||| ||||| |||| ||| ||||| || || || ||||| || || ||
Sbjct 506581 GGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGG 506640
Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269
||| || ||| |||| | || || || ||||| || || ||| | ||||||
Sbjct 506641 TTCGCTCTTTGG----GGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAG 506696
Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329
|| ||||||||||| ||||| || ||||| ||||| ||| || | || ||
Sbjct 506697 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACC 506756
Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374
|| || ||||||| || | || || ||||| ||||| ||||||
Sbjct 506757 TCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCG 506801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545554714760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |