Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 >seq2 Length=3044971 Score = 150 bits (166), Expect = 2e-31 Identities = 458/705 (65%), Gaps = 12/705 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || || || ||||||||||| || ||||| | ||||| || |||||| Sbjct 506103 TGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCC 506162 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 ||||| || || || || || | | | | || |||| || || | | | | Sbjct 506163 ATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGA 506222 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | || || ||||| || || || |||||||| | | | |||||| || | |||| Sbjct 506223 CGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCA 506282 Query 16856 ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--TAC 16913 || ||||| || || | || ||||| || |||| || || ||| | | | Sbjct 506283 CAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCC 506342 Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 | |||| | || || ||| | | ||| || || | ||| || || || | Sbjct 506343 T--CAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGT 506400 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | || | |||||||||| | ||| || ||||| || || || | || ||||| Sbjct 506401 CAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGA 506460 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 ||||| ||||| | ||| || || | |||||| || || || ||||| || ||||||| Sbjct 506461 GACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGA 506520 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153 ||| ||||| || || | ||| || | | || | |||| || ||||| || Sbjct 506521 CGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGA 506580 Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAAT 17209 | |||| ||||| |||| ||| ||||| || || || ||||| || || || Sbjct 506581 GGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGG 506640 Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 ||| || ||| |||| | || || || ||||| || || ||| | |||||| Sbjct 506641 TTCGCTCTTTGG----GGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAG 506696 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329 || ||||||||||| ||||| || ||||| ||||| ||| || | || || Sbjct 506697 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACC 506756 Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || || ||||||| || | || || ||||| ||||| |||||| Sbjct 506757 TCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCG 506801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545554714760