Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 >seq3 Length=3366276 Score = 147 bits (162), Expect = 3e-30 Identities = 467/717 (65%), Gaps = 23/717 (3%) Strand=Plus/Minus Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACC 145626 ||||| | ||| ||||| ||| |||||||||| |||| | || ||||||| | Sbjct 1530560 TGGGGCTTGTATCCCTCGAGCACAAAGTCCTCGTAGTTGAAACCGTCAATGTCCTTGATA 1530501 Query 145627 CGCCTCAGG--ATCCTGAGCCTGGGAAAG-GGCCGGGGGCTCCTGGTCAGCTGGAGCTTC 145683 ||| | | ||||| |||| || |||| || | || | | ||| |||| Sbjct 1530500 T--CTCGTGCAAAAGTGAGCTTGGGGAACTGGCCTGGCGTTCGAGCA-ATCTGCTGCTTG 1530444 Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || | |||||||| | ||| || || ||||| |||| | ||| |||| || || Sbjct 1530443 AGTGCGTCCACGTGATCCTTGTACACATGGGCGTCTCCCATGGTGTGAATGAGCTCTCCA 1530384 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803 || | | |||| ||||| | ||| ||| ||||| | |||| ||| |||||| Sbjct 1530383 CAGTCCAAATCGGTGACCTGGGCAATCATTCGGGTGAGCAGAGCGTAGGAGGCAATGTTG 1530324 Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC--TCCC 145861 ||||| || || || |||| ||| | || ||||| |||||||| || || || ||| Sbjct 1530323 AAGGGGACTCCAAGACCCAGGTCACATGATCGCTGATACAGCTGACACGACAGACGTCCT 1530264 Query 145862 CG--CC-----------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 || || || ||| || |||||||| | | ||| ||||| || || ||| Sbjct 1530263 CGTTCCGAGTTTTTGTACGACACATAAAACTGGCAAAACATGTGACAGGGAGGAAGCGCC 1530204 Query 145909 ATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTC 145968 || || || || || |||||||| || | || | || | | | | ||||| Sbjct 1530203 ATCTTTGGGAGATCGGCGGGGTTCCATGCAGACAGAATGATTCGACGGTCGTGAGGGTTG 1530144 Query 145969 CTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC 146028 | ||| ||||| | |||||||||||||||| || || |||||| || Sbjct 1530143 GTTCTGAGAGTGTGTATCACCTGTTTGAGCTGGTCCACGCCTTGGCCAGTGTAATCCGTG 1530084 Query 146029 TTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGG 146088 | | | | |||| |||| ||||| || | ||| ||||| || ||||| || |||||| Sbjct 1530083 TCACAATTCTTGTACTCGGCTCCGAAATGGCGCCATTGGAAGCCATAGACCGGTCCCAGG 1530024 Query 146089 TCCCCGGGCTCC-CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGC 146147 || || ||| ||||| |||||||||||| | ||||| ||| || || || | Sbjct 1530023 TCTCCCT-CTCGTCTGTGGCCCAGCCCGGCCTTTTCCAGGAACTCCTTAGATCCATTTCC 1529965 Query 146148 GTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 ||||||||| | | | || || || | ||| ||| ||| | || | || Sbjct 1529964 GTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTTTTGCCGTCGGTGCATCCAGCCACAAA 1529905 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||| | ||||| || || || || | ||||||| | ||||||||| |||||||| Sbjct 1529904 CCACAAAAGCTCCTCCAGAACGCCTCGGTAGAAGACTCGCTTGGTGGTGAGCAGGGG 1529848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076748368280