Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 87.8 2e-12
>seq6
Length=4002965
Score = 87.8 bits (96), Expect = 2e-12
Identities = 281/436 (64%), Gaps = 0/436 (0%)
Strand=Plus/Minus
Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169
|| ||||| ||||| ||||||| || || | || || | | || || |||| ||
Sbjct 3933969 AACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTG 3933910
Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229
| |||||||||| || |||| | ||||| ||||| | | | ||| || || |||
Sbjct 3933909 TTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATA 3933850
Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289
|| || || | ||||| | || | || || | || ||||||| || || ||
Sbjct 3933849 CCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATA 3933790
Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349
|||| || || || || ||| || || || | ||| || ||| | ||||| |
Sbjct 3933789 GACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAG 3933730
Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAAT 38409
|| || || || ||| ||||| || | | ||||| ||||| ||||||
Sbjct 3933729 ATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGG 3933670
Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469
|||||||||||||| | | || || || || || |||| | || | |||| |||
Sbjct 3933669 GGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG 3933610
Query 38470 TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATT 38529
|| || || || || | | || | ||||||| ||||| | ||| || | |||
Sbjct 3933609 TTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATG 3933550
Query 38530 AGCATATGTTGTGGTC 38545
| ||| ||||| ||||
Sbjct 3933549 ATCATCTGTTGGGGTC 3933534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524759004080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |