Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=3044971 Score = 91.5 bits (100), Expect = 1e-13 Identities = 327/502 (65%), Gaps = 11/502 (2%) Strand=Plus/Minus Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623 ||||||| || ||||| | || |||||| |||| | |||| |||| || || Sbjct 506599 AAAAAGGCCGACTGGGCCCTCAAGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGA 506540 Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683 || | || ||||| || || || | || || || || ||| || | || || Sbjct 506539 CTCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTC 506480 Query 52684 TACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCG 52742 | |||| || | || | | ||||| |||||||| || ||||||| | || || || Sbjct 506479 TGGCTCAAGAAGCGAGGTC-TCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 506421 Query 52743 CGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATTATAATACGCGCGTTAAAGAAA 52801 ||||| || ||||||| || ||||| || || | || | ||| | || | | Sbjct 506420 AGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCT----CGCACCTTGAGAACC 506365 Query 52802 AATTGTCATATGAAAAAATTCTAGACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGT 52861 | ||| | | | || ||| | || ||||| || | ||| || | |||| Sbjct 506364 GACCCTCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGT 506305 Query 52862 TTTTTACGGACGCTTTACCCGTATCAT-TGTTGGGCATGAACGCGACCATGATGTGCGAG 52920 | |||| |||||| | ||| | | | || | || |||||||| | |||||||| || Sbjct 506304 TCCTTACTGACGCTCTGCCC-TGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAG 506246 Query 52921 TACATCGAGTTTGTTGCGGACAGACTG-TTGATGCAGCTCGGTCAGCCGAAATACTATAA 52979 |||||||||||||| || ||| | ||| | | ||| |||||| | | || ||||| Sbjct 506245 TACATCGAGTTTGTCGCTGACCGTCTGCTAGTTGC-TCTCGGTAACTCCAAGGTGTATAA 506187 Query 52980 TGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTT 53039 | |||||||| || ||| | ||||| || || | ||||| || |||||||| Sbjct 506186 CTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTTT 506127 Query 53040 CGAGAGACGTGTGGGCGAGTAC 53061 ||||| || ||| ||| ||| Sbjct 506126 CGAGAAGCGAGTGTCCGACTAC 506105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063956594400