Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 5e-29
seq3 132 8e-27
>seq6
Length=4002965
Score = 140 bits (154), Expect = 5e-29
Identities = 194/269 (72%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| | | |||||||||||||| || ||||| ||||| ||||
Sbjct 3333132 CGCTAAGCGACACCGAAAGATTT-TGCGAGATAACATCCAGGGTATCACTAAGCCCGCTA 3333074
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| |||||||| | || | | | || || ||||
Sbjct 3333073 TCCGACGTCTTGCACGACGAGGTGGTGTCAAGCGAATTTCCGCCCAGATTTACGAGGAGA 3333014
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| ||||| ||||||| || | || || | ||||| || || || |
Sbjct 3333013 CCCGAAACGTTCTGAAGTCCTTCCTCGAGTCTGTCATTCGAGATGCCGTCACTTACACTG 3332954
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 3332953 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCCCTCAAGCGACAGG 3332894
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | |||| ||||| || |||||
Sbjct 3332893 GCCGAACCCTTTACGGTTTCGGTGGTTAA 3332865
>seq3
Length=3366276
Score = 132 bits (146), Expect = 8e-27
Identities = 193/270 (71%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| ||||||||||||||| || || ||||| ||||| || |
Sbjct 1596601 CGCTAAGCGACACCGAAAGAT-TCTTCGAGATAACATTCAGGGTATCACTAAGCCCGCCA 1596659
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| || ||||| | || | | |||| || ||||
Sbjct 1596660 TCCGACGTCTTGCGCGACGAGGTGGTGTGAAGCGAATTTCCGCCCAGATCTACGAGGAGA 1596719
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| ||||| || | ||||| | || || || ||| || |
Sbjct 1596720 CCCGAAACGTTCTCAAGTCTTTCCTTGAGTCTGTTATTCGAGACGCCGTCACCTACACTG 1596779
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 1596780 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCTCTCAAGCGACAGG 1596839
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | |||| ||||| || ||||||
Sbjct 1596840 GCCGAACCCTTTACGGTTTCGGTGGTTAAT 1596869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075193599851
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |