Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 187 3e-42
seq6 136 5e-27
seq4 100 4e-16
>seq2
Length=3044971
Score = 187 bits (206), Expect = 3e-42
Identities = 389/574 (68%), Gaps = 8/574 (1%)
Strand=Plus/Plus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
||||||||||||||||| || || |||||||| || ||||| || ||||| || ||
Sbjct 506405 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACC 506464
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
||||| || ||||| || ||||| ||||| || || || |||||||| || || || ||
Sbjct 506465 TCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGC 506524
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCT--GTCATGTATCCACTTTTGAGC 33494
||||||||||| |||| ||||||| | || | || ||| |||||||| | ||
Sbjct 506525 GGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGC 506584
Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554
||| |||||||| || || | || || || || || ||||| || || || ||| ||
Sbjct 506585 CCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG 506644
Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614
|| || || || | || || ||||||| || || | || || || |||||
Sbjct 506645 CTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTT 506704
Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674
|| || ||||| || |||||||| || | ||||||| ||| || || |
Sbjct 506705 CTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGA 506764
Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734
||||| || ||| || || || || || ||||| ||| ||||| || || | ||
Sbjct 506765 GAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAAC 506824
Query 33735 ATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT---TTATTCCAATCATTGATATCTT 33790
|| || || | || || | |||| ||| || | ||| ||| || || |
Sbjct 506825 GTGGGAGATGAAGAACCGCTCATC-GTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT 506883
Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850
| | ||| | || || ||||||| || || ||||| ||||| || ||||| | ||
Sbjct 506884 TTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC 506943
Query 33851 AGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|||| || | || ||||| ||||| | |||||
Sbjct 506944 AGATTTCGTGGTACTGGATGGGGAAGAGCACAAA 506977
>seq6
Length=4002965
Score = 136 bits (150), Expect = 5e-27
Identities = 451/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Minus
Query 63141 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 63200
||||| || || | || | ||| | || || || || | || ||||||| | |||
Sbjct 3934137 AACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCAT 3934078
Query 63201 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63260
|| ||| | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 3934077 TCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGG 3934018
Query 63261 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63320
|||| || || | || || ||||| |||||| || ||| |||| | | |||
Sbjct 3934017 TCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATA 3933958
Query 63321 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63380
|| ||||| || || | ||| || || | | ||||| || ||||| |||||||||
Sbjct 3933957 TCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGA 3933898
Query 63381 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63440
|| | ||||| |||||||| ||||| || | || ||| || | |||||||| || |
Sbjct 3933897 TCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTT 3933838
Query 63441 CCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63500
|| || || || | || ||| ||| | || || || || || || ||||| ||
Sbjct 3933837 CCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATA 3933778
Query 63501 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATG 63560
|| || || || || || | || || ||| | || || ||||| || || |||
Sbjct 3933777 CCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATG 3933718
Query 63561 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63620
|| || ||||||| | || ||||| ||||| || | | |||||| ||
Sbjct 3933717 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCG 3933658
Query 63621 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTC 63679
|| | | || || |||||||| || || | || | ||| | ||| ||||| |||||
Sbjct 3933657 TTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG-TTGTAGGTCTC 3933599
Query 63680 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63739
||| || | | || | || || || || | ||| ||||| | ||| || ||
Sbjct 3933598 AATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTG 3933539
Query 63740 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63799
|||| || | | ||| | | || || ||| | | |||| || || ||
Sbjct 3933538 GGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGGGTCTTGAA 3933479
Query 63800 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||||| |||||||| | |||||||| ||||| | |||
Sbjct 3933478 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 3933440
>seq4
Length=3629463
Score = 100 bits (110), Expect = 4e-16
Identities = 461/713 (65%), Gaps = 30/713 (4%)
Strand=Plus/Plus
Query 63135 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATTCATCCGGACACATCAA 63193
|| ||||| || ||||||||||||| | ||| || || | || | ||||| | |
Sbjct 425066 CGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCCTTTCTG-GGACAGAAAAG 425124
Query 63194 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63253
||||||| | || ||| || ||| |||||| || ||||| | ||| | ||
Sbjct 425125 AGACCACTTTTCGCCATTCTCGACTTTGCGCATAAACAGGTCAGGCACCCATAAGGCGTA 425184
Query 63254 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAA 63310
|| || || | || || || ||||||| || || ||||| |||| |||||
Sbjct 425185 GAAGAGGTCACGGGCTCGATTTTCCTCGGCACC---ATGGTTTTTGCGCAGATTCAGGAA 425241
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
||| ||| || | |||||| || ||||| || | || | |||| || ||||||||
Sbjct 425242 ATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAACGCTCCTGGACGTTTGTT 425301
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|||||| || || | ||| | ||| ||||| || | ||||| | ||| |||| || ||
Sbjct 425302 TCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTGAGCATAGGAACGATTCC 425361
Query 63431 GTTTGATATACCATTGGTACCGGAGAT-ATAGCTTCCACTGGCACGAATATTACTAAT-T 63488
| ||| | || | | || | || | ||| ||| |||| | ||| || || |
Sbjct 425362 GGAGGATCTTCCTTGAGACCCAGTAATGAGAGC-TCCCTTGGCTCTAATGTTGTGGATAT 425420
Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTGTCATA 63547
| || || || || || || |||| |||||| || || |||||| | |||||| ||
Sbjct 425421 GCAAG-CCGATACCTCCGGCGGTTTTGGAGATTTGGGCACA-CGTTTTGAGCGTGTCGTA 425478
Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607
||| || || ||| || | |||| | || |||||| || | |||| |
Sbjct 425479 GATGCCGTCGATGGAGTCTGCTGCCATGGCCACCAGGAAACAGGACGAAAGTTGGCCCTG 425538
Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TA 63666
||||| ||||| || || |||||||| || || || || ||||| || | |
Sbjct 425539 GGGGGTTCCTGCATTGAACAAAGTAGGAGACGCATGTGTGAA----TTTTCTGAGCGACA 425594
Query 63667 GA---TTGTACGTCTCAATAGC--TGAGTCTAT-ATC-CCATTGATGAATTCCTACTGCG 63719
|| | ||| || || | ||| ||| ||| |||| |||| || | ||
Sbjct 425595 GAGCCTGGTAGGTTTCGCGCACCTTGAAAATATCATCTCCATGGATG----CCCAGGGCC 425650
Query 63720 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63779
|| ||||| ||||| || ||||||| || || | || | | | |||| |||||
Sbjct 425651 ACTCGCATCAACATATGTTGAGGTCGCTCCACCACGTTTCCGCCAACTCTCAATAAGTAT 425710
Query 63780 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63832
|| || |||| || || || ||||| ||| ||| | | |||||| | |||
Sbjct 425711 GACTTCTCCAGGGTCTTGAATCCAAAGTAGGAGTAAGTCATGTCTCGGTAGTA 425763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947145492120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |