Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 289 7e-73 >seq6 Length=4002965 Score = 289 bits (320), Expect = 7e-73 Identities = 1155/1792 (64%), Gaps = 56/1792 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| | | ||||| || |||| |||| | ||| || || || || Sbjct 3933482 AAGACCCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCTGTTGCCGAGCGACCCCAA 3933541 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | |||||||| || | ||| || ||||| Sbjct 3933542 CAGATGATCATGCGAGTCTCTGTCGGTATCCACGGCGACAACATTGCCCGGGCCATTGAG 3933601 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || | || || ||| ||| ||||| ||||| | || || | ||||| Sbjct 3933602 ACCTACAAC--TATATGT-CTCAGAAGTACTTCACTCACGCTTCCCCCACTCTCTACAAC 3933658 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || ||||||| | || |||||||| || || || ||| | || ||||||||||| ||| Sbjct 3933659 GCCGGAACTCCCCAGCCTCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 3933718 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||| || |||| || || || || | |||||||| ||||||||| ||| ||||| Sbjct 3933719 ATCGACGGCATCTACGATACCCTCAAAACCTGTGCTCTGATTTCCAAGTCTGCCGGCGGT 3933778 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755 || ||| | || |||||||| | || || || | | |||||| || || || Sbjct 3933779 ATCGGTCTGTCTATCCACAACATCCGAGCTACTG-GCTCCTACATTGCTGGAACTAACGG 3933837 Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815 | ||| || || | || |||||||| ||||| | | |||| || || | ||||| || Sbjct 3933838 AACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTATAACAACACCGCCCGATACGTTGA 3933897 Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875 ||||| || ||||| || || ||||| ||||| || ||||| || | ||| Sbjct 3933898 TCAGGGAGGCAACAAGCGACCTGGTGCCTTTGCAATGTACCTTGAGCCCTGGCACGACGA 3933957 Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935 ||| || ||||| ||||| || || ||| ||||| || || | || || || || Sbjct 3933958 TATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAAGAGATTCGAGCCCGAGA 3934017 Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA--- 363992 |||||| || || ||| | | |||| || ||| |||| || || |||| || Sbjct 3934018 CCTGTTCCTGGCTCTGTGGATCCCCGACCTGTTCATGGAGCGAGTCGA-GCAG--AACGC 3934074 Query 363993 -GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACG 364051 ||| ||| | || | ||||| |||| || || |||||| ||| || | ||||| | Sbjct 3934075 TGAA-TGGACCCTGATGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTATGGTGATG 3934133 Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACAATTCCC 364110 | | | || ||||| |||| || |||||| |||| || || || || Sbjct 3934134 AGTTTAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCT 3934192 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||| | || | |||| ||| | || | |||| ||| Sbjct 3934193 GCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGCAACCCCTTCATG 3934252 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| || || |||||||| |||||||||||| || |||| || |||||| || Sbjct 3934253 CTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACAATTAAGTCT 3934312 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 ||||| || |||||| | || ||| | |||| || ||| || || || ||| Sbjct 3934313 TCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAAC 3934372 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338 || || || ||||| || || | ||||| | ||| | || || | ||| Sbjct 3934373 CTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGAGACGACACCAACTCGTTCTACGAC 3934432 Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 | || | || | ||| | || | |||| | | | || ||| || | |||| Sbjct 3934433 TTCAAGAAGCTGCACGACATTGCCAAGGTCATTGTGC--GAAACCTCAACGCTATCATCG 3934490 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || || || || || | || || ||| || ||||| ||||| || || || |||| Sbjct 3934491 ACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAGTCTAACATGCGACACCGACCCATTG 3934550 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTGATTC 364514 ||| ||||| ||||| || || ||| || ||| |||| | || | ||||||| || Sbjct 3934551 CTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATG--GCTCTACGACTCCCATTTGAGTC 3934608 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || || | ||||||| || || || || | || | Sbjct 3934609 CGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCTGTCGA 3934668 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 || || | || |||| | || ||| || | |||| |||||| Sbjct 3934669 AGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGCTCCCCTGC 3934728 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || |||| | ||||||| ||||| ||||| || || || || | | ||| | || Sbjct 3934729 CTCCAAGGGTGACCTCCAGTTCGATCTCTGGAACGTGACTCCTTCCGAGCTGTGGGAGTG 3934788 Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCC 364754 ||| || |||| | | |||| ||||| || ||||| || | || || Sbjct 3934789 GGACGATCTCAAGGCCAAGATCATGAAGACTGGTATGCGAAACTCGCTGTTGGTCGCTCC 3934848 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 ||||||||| || || ||| | ||||| || || ||| ||||||||||| || | || Sbjct 3934849 CATGCCCACTGCCTCCACTTCCCAGATTCTTGGTTTCAATGAGTGCTTCGAGCCCTACAC 3934908 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 ||| |||| || || || |||||| | || ||||| | | | || || | || Sbjct 3934909 TTCCAACATTTACTCTCGACGAGTTCTTGCTGGTGAATTCCAGATTGTCAACCCCTGGCT 3934968 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 ||||||| || || || |||||| || | |||||||||| || | || Sbjct 3934969 GCTCAAGGACCTGGTTGAGGTTGGCCTGTGGAACGAGACCATGAAGAACCGAATTGTTGC 3935028 Query 364935 CGCTAATGGTTCTGTGCAGAACAT-TCCAGGATT-TCCAGAAGATCTGAAGCCTATTTAC 364992 | || || || ||||||||||| ||| ||| |||| | ||| ||| | ||| Sbjct 3935029 TGACAACGGATCCGTGCAGAACATCCCCAACATTCCCCAGGAAATC--AAGGACCTGTAC 3935086 Query 364993 AAAACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCG 365045 || ||||| ||||| ||||| | ||||| ||||||| ||||| | |||||| Sbjct 3935087 AAGACCGTGTGGGAGATTTCTCAGAAGCGAA---TCATTGAGATGGCCGCTGACCGATCC 3935143 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105 | | | || | | ||| ||||| | ||| | ||| | | || ||| | Sbjct 3935144 CCCTTCATTGACCAGTC----TCAGTCCCTCAACATTCACATCAAGGACCCTACCATGGG 3935199 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 |||||| || |||||||| |||||||| ||||| ||||| ||||||||| Sbjct 3935200 CAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGT 3935251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353483105474