Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 159 4e-34
seq6 158 2e-33
seq4 105 8e-18
>seq2
Length=3044971
Score = 159 bits (176), Expect = 4e-34
Identities = 383/574 (67%), Gaps = 8/574 (1%)
Strand=Plus/Plus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| ||||||||||||| || | |||||||| || ||||| || ||||| || ||
Sbjct 506405 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACC 506464
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
||||| || ||||| || ||||| || || || || || ||||| || || || || ||
Sbjct 506465 TCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGC 506524
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCT--GTCATGTATCCACTTTTGAGC 32851
||||||||||| |||| ||||||| | || | || ||| |||||||| | ||
Sbjct 506525 GGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGC 506584
Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911
||| |||||||| || || | || || || ||||| || || || || || ||| ||
Sbjct 506585 CCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG 506644
Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971
|| || || || | ||||| || |||| || || | || || || |||||
Sbjct 506645 CTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTT 506704
Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031
|| || || || || ||||||||||| | ||||||| ||| || || |
Sbjct 506705 CTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGA 506764
Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091
||||| || | | || || || || || ||||| ||| ||||| || || | ||
Sbjct 506765 GAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAAC 506824
Query 33092 ATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT---TTATTCCAATCATTGATATCTT 33147
|| || || | || || | |||| ||| || | ||| ||| || || |
Sbjct 506825 GTGGGAGATGAAGAACCGCTCATC-GTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT 506883
Query 33148 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 33207
| | ||| | || || ||||||| || || ||||| ||||| || ||||| | ||
Sbjct 506884 TTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC 506943
Query 33208 AGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|||| || || || || || || || | |||||
Sbjct 506944 AGATTTCGTGGTACTGGATGGGGAAGAGCACAAA 506977
>seq6
Length=4002965
Score = 158 bits (174), Expect = 2e-33
Identities = 456/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Minus
Query 62996 AACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCAC 63055
||||| || || | || | ||| || || || || || | || ||||||| | |||
Sbjct 3934137 AACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCAT 3934078
Query 63056 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63115
|| ||| | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 3934077 TCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGG 3934018
Query 63116 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63175
|||| || || | || || ||||| |||||| || ||| |||| | | |||
Sbjct 3934017 TCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATA 3933958
Query 63176 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63235
|| ||||| || || | ||| || || | | ||||| || ||||| |||||||||
Sbjct 3933957 TCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGA 3933898
Query 63236 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 63295
|| | ||||| |||||||| ||||| || | || ||| || | ||||| ||||| ||
Sbjct 3933897 TCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTT 3933838
Query 63296 CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63355
|| || || || | || ||| ||| | || || || || || || ||||| ||
Sbjct 3933837 CCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATA 3933778
Query 63356 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 63415
|| || || || || || | || || ||| | ||||| |||||||| || ||
Sbjct 3933777 CCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATG 3933718
Query 63416 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63475
|| ||| ||||||| | || ||||| ||||| || | | |||||| ||
Sbjct 3933717 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCG 3933658
Query 63476 TTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTC 63534
|| | | || || ||||||||||| || | || | ||| | ||| ||||| |||||
Sbjct 3933657 TTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG-TTGTAGGTCTC 3933599
Query 63535 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63594
||| || | | || | || || || || | ||| ||||| | ||| || ||
Sbjct 3933598 AATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTG 3933539
Query 63595 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63654
|||| || | | ||| | | || || ||| | | |||| || || ||
Sbjct 3933538 GGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGGGTCTTGAA 3933479
Query 63655 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693
||||| |||||||| | |||||||| ||||| | |||
Sbjct 3933478 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 3933440
>seq4
Length=3629463
Score = 105 bits (116), Expect = 8e-18
Identities = 462/713 (65%), Gaps = 30/713 (4%)
Strand=Plus/Plus
Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA-CATTCATCCGGACACATCAA 63048
|| ||||| || ||||||||||||| | |||| || || | || | ||||| | |
Sbjct 425066 CGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCCTTTCTG-GGACAGAAAAG 425124
Query 63049 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63108
||||||| | || ||| || ||| |||||| || ||||| | ||| | ||
Sbjct 425125 AGACCACTTTTCGCCATTCTCGACTTTGCGCATAAACAGGTCAGGCACCCATAAGGCGTA 425184
Query 63109 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAA 63165
|| || || | || || || ||||||| || || ||||| |||| |||||
Sbjct 425185 GAAGAGGTCACGGGCTCGATTTTCCTCGGCACC---ATGGTTTTTGCGCAGATTCAGGAA 425241
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
||| ||| || | |||||| || ||||| || | || | |||| || ||||||||
Sbjct 425242 ATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAACGCTCCTGGACGTTTGTT 425301
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|||||| || || | ||| | ||| ||||| || | ||||| | ||| |||| || ||
Sbjct 425302 TCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTGAGCATAGGAACGATTCC 425361
Query 63286 ATTGGATGTACCATTGGTCCCTGAGAT-ATAGCTTCCACTGGCACGAATATTACTAAT-T 63343
|||| | || | | ||| | || | ||| ||| |||| | ||| || || |
Sbjct 425362 GGAGGATCTTCCTTGAGACCCAGTAATGAGAGC-TCCCTTGGCTCTAATGTTGTGGATAT 425420
Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATA 63402
| || || || || || || |||| |||||| || || |||||| | ||| || ||
Sbjct 425421 GCAAG-CCGATACCTCCGGCGGTTTTGGAGATTTGGGCACA-CGTTTTGAGCGTGTCGTA 425478
Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462
|||||| || || || | |||| | || |||||| || | |||| |
Sbjct 425479 GATGCCGTCGATGGAGTCTGCTGCCATGGCCACCAGGAAACAGGACGAAAGTTGGCCCTG 425538
Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG-TA 63521
||||| ||||| || || |||||||| || || || || ||||| || | |
Sbjct 425539 GGGGGTTCCTGCATTGAACAAAGTAGGAGACGCATGTGTGAA----TTTTCTGAGCGACA 425594
Query 63522 GA---TTGTACGTCTCAATAGC--TGAGTCTAT-ATC-CCATTGATGAATTCCTACTGCG 63574
|| | ||| || || | ||| ||| ||| |||| |||| || | ||
Sbjct 425595 GAGCCTGGTAGGTTTCGCGCACCTTGAAAATATCATCTCCATGGATG----CCCAGGGCC 425650
Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634
|| ||||| ||||| || ||||||| || || | || | | | |||| |||||
Sbjct 425651 ACTCGCATCAACATATGTTGAGGTCGCTCCACCACGTTTCCGCCAACTCTCAATAAGTAT 425710
Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687
|| || |||| || || || ||||| ||| ||| | | |||||| | |||
Sbjct 425711 GACTTCTCCAGGGTCTTGAATCCAAAGTAGGAGTAAGTCATGTCTCGGTAGTA 425763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631944557200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |