Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 3e-38
seq5 165 2e-35
seq6 132 1e-25
seq4 87.8 4e-12
>seq2
Length=3044971
Score = 174 bits (192), Expect = 3e-38
Identities = 565/861 (66%), Gaps = 26/861 (3%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||| || || | |||||| |||||||||| ||||||||||||||||||||| |||
Sbjct 506124 TCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 506183
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| || ||| ||||| | || || || || | | ||||| || |||||||| |
Sbjct 506184 GAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGACGGTCAGCGACAAACTCGATG 506243
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | | |||||| |||| || || ||| || | || ||| | |
Sbjct 506244 TACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAGCGTCAGTAAGG 506303
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAAT--TGCCTTCACCTGT-GCCAGAGAC 251799
|| |||| ||| || |||| | |||| ||||| | | ||| | | | ||
Sbjct 506304 AACTCCTGCTCGATGCCAACAG---CCTCGACAATGACGTCCTCAACAATCTTCTTTGAG 506360
Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859
| |||||| || | ||| | || || | |||| | |||||||||||||||
Sbjct 506361 GGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCT 506420
Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919
|| ||||| ||||||||| | ||||||||||| | || || ||| ||||||||
Sbjct 506421 CGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAG 506480
Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGG 251979
||||| | | || || || ||||| | | |||||||| | | |||| ||
Sbjct 506481 AAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCAATGAGT 506540
Query 251980 CGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTT 252036
||||| |||| |||| || | || | |||| | ||||| | ||||| |||
Sbjct 506541 CGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTCGGCCTT-TTT 506599
Query 252037 CCAACCGC-GGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTC 252095
| || |||||| || ||||| || | || || || | ||||| |||||
Sbjct 506600 CTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCTTTGGGGTCCTT 506659
Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTG 252155
|||| | || | ||| || ||||| |||| || |||||| || | | |||||
Sbjct 506660 GATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTG 506719
Query 252156 GTAAGCATAGAA----TAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTG 252211
| | | ||||| | | | | ||| ||| | | || || ||| || |
Sbjct 506720 GAAGCCGTAGAAGCACTTGGC-CTCGG--GGGCCTG-CACCTCGCCGGAGAATCGCTCAA 506775
Query 252212 CAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGA 252271
| | |||||| | || || || ||| | | |||||||| | |||| | |||||
Sbjct 506776 CCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGA 506835
Query 252272 AGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTC--AGAGG 252329
|| |||||||||| |||||| ||| |||||| | ||||||| ||| |||
Sbjct 506836 AGAACCGCTCATCGTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT--TTCCAAGATC 506893
Query 252330 AACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACATCAG 252388
|| || || | |||||||| | || | | |||||||||||||| ||| | | ||
Sbjct 506894 AATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGC-CAGATTTCGT 506952
Query 252389 GGTACTTGATTGGGAA-AGCA 252408
|||||| ||| ||||| ||||
Sbjct 506953 GGTACTGGATGGGGAAGAGCA 506973
>seq5
Length=4198534
Score = 165 bits (182), Expect = 2e-35
Identities = 418/624 (67%), Gaps = 29/624 (5%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||||||| ||||||| ||||| || || || |||| ||||||||||| |||
Sbjct 1626861 GGCGAGGATCTGTGTAACTGTGAGTTCTCTCTGGCTTACGGTGCTAAGATTCTGCTGAAC 1626920
Query 279405 TCTACCCGCCT-CAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
|||| || | || ||||||| ||| || || |||||| ||||| || || ||
Sbjct 1626921 CGAACCCAGCTGCGAC-TCAAGCGAGGCCGACGATACGGTCTCTGTGGTCCTAACGGTGC 1626979
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|||||| ||| || ||||| |||||||| ||||||||| | || || ||||| || |
Sbjct 1626980 TGGTAAGTCCACCCTGATGCGAGCCATTGCCAACGGTCAGGTCGAGGG-TTTCCCCACCC 1627038
Query 279524 ATCTGAGGTAAGGA-CAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCA 279582
| | || || | || | || || |||||||| ||| | | | | || | ||
Sbjct 1627039 AGGAGGAGTGTCGAACTGTCTTCGTCGACCACGACATTGACGGTACCCACGCCGACACCA 1627098
Query 279583 CTGTGTTCGACTTCCTAACGTCTGACAATCAG--GTTATGGAAATCAGCTCTCCTGAGGA 279640
|| |||||| ||||| || | | | | | | ||| | || |||||
Sbjct 1627099 ACGTTGTCGACT-----ACGTCCGAAAGACCGCCGGTGAGTCCATCGGTACTGAGGAGGA 1627153
Query 279641 AATCATCCAGAAACTGGAGGCCAATGGTTT---TGATGAAAGAATGCGTAATCTGCCAGT 279697
|| || | ||| | | || ||| || | | || | |||| |
Sbjct 1627154 GGTCCGAAAGCAGCTGCTTGACTTCCTGTTCACTGACGAGATGACCCGAA---TGCCCAT 1627210
Query 279698 AGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCT---CACTCGCGCCATTCTACT 279754
|||||||| ||||| ||||||||||||||||| || |||| || | | | |
Sbjct 1627211 CACCTCTCTGTCTGGTGGATGGAAGATGAAGCTGGCTCTTGCCACTGCCGTCCTCCGAAA 1627270
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814
| |||||| |||| |||||||||||||| |||||||| |||| ||| |||||| ||
Sbjct 1627271 G---GCCGATATCCTGCTGCTTGATGAGCCTACCAACCATCTGGATACCGTCAACGTTGC 1627327
Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGA 279874
||||| || |||||| | || ||| | | | | ||| |||| ||||| |||||
Sbjct 1627328 TTGGCTGGTCAACTACCTTAACA-CCTGTGG--TATCACCTCCATCATCGTCTCCCACGA 1627384
Query 279875 CTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCT 279934
|||||| ||||| ||| ||| || |||||||||||| |||| | | |||||
Sbjct 1627385 CTCTGGTTTCCTCGATAACGTCTGTGAGTACATCATTCACTACGAGCGA---TTCAAGCT 1627441
Query 279935 CTCCAAGCACATCGGCAACCTGTC 279958
| ||| ||| || ||||||||
Sbjct 1627442 CCGAAAGTACAAGGGTAACCTGTC 1627465
Score = 95.1 bits (104), Expect = 2e-14
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 280677 CTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAG 280736
|| ||||| || |||||| || |||||||||| || || ||||| ||||| || |||
Sbjct 1628232 CTTGGTCTCGAGCCCGAGCTTGTCTCTCACTCTCGAATCCGAGGTCTGTCTGGTGGTCAG 1628291
Query 280737 AAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796
|||||||| ||||| | | || | ||||| | || || | ||||| || ||
Sbjct 1628292 AAGGTCAAGCTTGTGCTTGCCGCCTGTACCTGGCAGCGACCCCATCTTATCGTCCTTGAT 1628351
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|||||||||||||||||||| || || || || ||||||
Sbjct 1628352 GAGCCTACCAACTATCTGGATCGAGACTCTCTTGGAGCTCTG 1628393
>seq6
Length=4002965
Score = 132 bits (146), Expect = 1e-25
Identities = 495/764 (65%), Gaps = 23/764 (3%)
Strand=Plus/Minus
Query 293020 TAATACACAAGTGTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCATAGAC 293079
|| |||| | ||| || |||||||||||||| ||||||| |||| || || | |
Sbjct 3935259 TAGTACATACCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAG---C 3935203
Query 293080 TTCAGTGTGGGAGTGGCCAGGAA---AAGGTTCATGCTCTGCGTCTGATCGACAAAGGCA 293136
|| ||| || | || || || ||| | | ||| | ||| || | ||||
Sbjct 3935202 TTGCCCATGGTAGGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGG 3935143
Query 293137 CCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTAC 293196
|| ||||| || | ||||| | | |||| ||| ||||||||| |||||||||
Sbjct 3935142 GATCGGTCAGCGGCCATCTCAATGATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTAC 3935083
Query 293197 ACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTG---GCA 293253
| |||||| || | ||||| | ||||| | || ||||||| |||
Sbjct 3935082 AGGTCCTTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGA---TCCGTTGTCAGCA 3935026
Query 293254 ATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAG 293312
| ||| |||||||||| |||||| ||| || || || ||| || || || ||
Sbjct 3935025 ACAATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCT-CAACCAGGTCCTTGAGCAG 3934967
Query 293313 GTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGT 293372
| | |||||||| |||| |||||||| ||| || || ||||||||| |||||
Sbjct 3934966 CCAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGT 3934907
Query 293373 GATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAG 293432
| ||| ||| |||| | || |||||| | ||| || || || ||||| |
Sbjct 3934906 GTAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGG 3934847
Query 293433 AGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGACACGCGATTCGAGACCCGCCCA 293489
||| | ||| ||||| | || ||| |||| ||| | | |||| | ||||
Sbjct 3934846 AGCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCA 3934787
Query 293490 GTCC-AGAGCAGTCTGA-GGTGTAACACCCCAGAGATGATACTGCATGATACCCTTGCTG 293547
||| | ||| || || || || || |||||||| |||| | | ||||||| |
Sbjct 3934786 CTCCCACAGC--TCGGAAGGAGTCACGTTCCAGAGATCGAACTGGAGGTCACCCTTGGAG 3934729
Query 293548 GCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGCC 293607
||||| || |||| ||||| | || || | |||| || | |||| |||| ||
Sbjct 3934728 GCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCT 3934669
Query 293608 TCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCA 293667
|| ||||| | ||| ||| ||||||||||| ||||||||| |||| |||
Sbjct 3934668 TCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCG 3934609
Query 293668 GAGTCAAACGGCA-TCTTCAGCTGGAAGAACACATCCTGCAGACCCTGTACACCTACACC 293726
|| ||||| || | || | || | ||| || ||||||||| ||||| | | |
Sbjct 3934608 GACTCAAATGGGAGTCGT-AGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAGAGC 3934550
Query 293727 AACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAACCG 293770
|| ||| || | ||| |||| | ||| |||||||| ||||
Sbjct 3934549 AATGGGTCGGTGTCGCATGTTAGACTTCTTGGCCTCGGGGACCG 3934506
>seq4
Length=3629463
Score = 87.8 bits (96), Expect = 4e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896
||||| ||||| || || ||||||||||| || || |||| | |||||| || |
Sbjct 3120213 TGCACGCTCATTCTCACTGAGGGAGACTCCGCCATGACCATGGCGAACGCTGGACTGTCT 3120272
Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956
||| | ||||| ||| | ||||| ||| || || ||||||||| |||||||||||||
Sbjct 3120273 GTGATTGGTCGAGAACGATATGGCGCCTTTCCTCTGCGTGGTAAGATGCTCAACGTGCGA 3120332
Query 217957 GATGCCTC 217964
|| || ||
Sbjct 3120333 GAGGCGTC 3120340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836707815887
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