Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
seq6 87.8 2e-12
>seq5
Length=4198534
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/200 (72%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATA-GTACGAGAATCTTCA-AGTTGTTTAC 114243
|| || || || ||||||||||| ||| | | || ||| ||| || || || ||||
Sbjct 2277405 GTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAAGTTCGACCATCCTCGGAGCTGCTTAC 2277346
Query 114244 CAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTT 114303
||||| | || || ||||| |||||||| ||||| || || ||||| |||||| |
Sbjct 2277345 CAGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACT 2277286
Query 114304 TTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT-TTTGCCGGTCAGA 114362
||| ||| | | |||||||| || || || || | || | || ||| || ||||||
Sbjct 2277285 TTAATTGT-CGATGGTGTCGGAAGACTCAACCTCGAAGG--ATGGTCTTTTCCAGTCAGA 2277229
Query 114363 GTTTTTACAAAAATCTGCAT 114382
|| || || |||||||||||
Sbjct 2277228 GTCTTGACGAAAATCTGCAT 2277209
>seq6
Length=4002965
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| || || |||| || || | ||| | || || || || || |||||||| ||
Sbjct 1337581 ACCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1337522
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || || || || ||||| ||| |||| || ||||| |||||||| ||
Sbjct 1337521 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 1337462
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || || ||||| ||||| || | | || | |||||||| || || ||
Sbjct 1337461 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1337402
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || ||||| || || || ||||||||||||||
Sbjct 1337401 CTCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1337354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134364157284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |