Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 seq6 87.8 2e-12 >seq5 Length=4198534 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATA-GTACGAGAATCTTCA-AGTTGTTTAC 114243 || || || || ||||||||||| ||| | | || ||| ||| || || || |||| Sbjct 2277405 GTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAAGTTCGACCATCCTCGGAGCTGCTTAC 2277346 Query 114244 CAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTT 114303 ||||| | || || ||||| |||||||| ||||| || || ||||| |||||| | Sbjct 2277345 CAGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACT 2277286 Query 114304 TTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT-TTTGCCGGTCAGA 114362 ||| ||| | | |||||||| || || || || | || | || ||| || |||||| Sbjct 2277285 TTAATTGT-CGATGGTGTCGGAAGACTCAACCTCGAAGG--ATGGTCTTTTCCAGTCAGA 2277229 Query 114363 GTTTTTACAAAAATCTGCAT 114382 || || || ||||||||||| Sbjct 2277228 GTCTTGACGAAAATCTGCAT 2277209 >seq6 Length=4002965 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || || |||| || || | ||| | || || || || || |||||||| || Sbjct 1337581 ACCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1337522 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || || || || || ||||| ||| |||| || ||||| |||||||| || Sbjct 1337521 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 1337462 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | |||||||| || || || Sbjct 1337461 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1337402 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || ||||| || || || |||||||||||||| Sbjct 1337401 CTCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1337354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134364157284