Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 86.0 1e-11
seq2 84.2 5e-11
>seq5
Length=4198534
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/228 (70%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC-GGC 288305
||||| ||||||| || | |||||| | ||| |||| | | || || ||||| ||
Sbjct 2276772 CCACCTCGGAGTCGGAGAAAGAGATGGAGAGTGGACTCTTCT-GAATGTTTTAGTCCGGA 2276714
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || | || || || | || || || ||||| ||||| ||||| || | ||
Sbjct 2276713 AAGAGTTGGACCATCCTCGAGCTGCTTACCAGCGAAAATCAGTCGCTGCTG-GTCCGGGG 2276655
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||| ||| ||||| || || ||| || || || | ||| || || ||
Sbjct 2276654 GAATCCTCCTTG-TCCTGAATCTTGACTTGACAATTGTCGATGGTGTCGGAAGACTCAAC 2276596
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| || ||||||||||||||||| ||||||||
Sbjct 2276595 CTCGAGAGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAAATCTGCAT 2276548
>seq2
Length=3044971
Score = 84.2 bits (92), Expect = 5e-11
Identities = 131/184 (71%), Gaps = 10/184 (5%)
Strand=Plus/Minus
Query 268462 TTTCCCATTCAATATCATGATCTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTGG 268521
|| ||||| || || || || | ||| | |||||||||||||| | ||| | || |||
Sbjct 506968 TTCCCCATCCAGTACCACGAAATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGG 506909
Query 268522 ACCACCGAGGAAGTTCCTCTT--AACGCAGACGTTGCAGACTGGCGTGAGAA---ACTGA 268576
|| | ||||| || |||| || | ||| | | |||||| ||||| ||| |
Sbjct 506908 ACAGCTGAGGAGATTGATCTTGGAAAG--GACATGGGTGACTGG---GAGAACAGACTCA 506854
Query 268577 ACAACGATGAACGACACTTCATCAAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTA 268636
|||||||||| || ||||||| || |||| | |||||||| | |||||||||||
Sbjct 506853 ACAACGATGAGCGGTTCTTCATCTCCCACGTTCTCGCATTCTTTGCTGCCTCCGACGGTA 506794
Query 268637 TCGT 268640
||||
Sbjct 506793 TCGT 506790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654294199746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |