Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 3e-33
seq4 159 3e-33
seq1 159 3e-33
>seq5
Length=4198534
Score = 159 bits (176), Expect = 3e-33
Identities = 559/865 (65%), Gaps = 16/865 (2%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 12313 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 12372
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 12373 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 12430
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 12431 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 12488
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| | ||||| ||| |||| || |
Sbjct 12489 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATC 12548
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 12549 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCG 12608
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || |||| ||||| || | || |
Sbjct 12609 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCAGTTGAGAAGGTCCT 12668
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || ||| | || ||||| ||||||||||| || ||
Sbjct 12669 GAAGGACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 12728
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || ||| | | ||
Sbjct 12729 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAA 12785
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 12786 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 12845
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | || ||| |||| || |
Sbjct 12846 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTTGACGTTGCTCCCCTTT 12904
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
||||||| | || || | ||| ||| ||||||| || || ||| |||| | ||||
Sbjct 12905 CTCTTGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTA 12964
Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438
| || || || ||| || || || || | || || || ||| ||| |
Sbjct 12965 TCCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTGA 13024
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
|||| | ||||| || || || || || ||||| || ||||||| |||
Sbjct 13025 TTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGATAACAACATCCTTGGTAAGTTTG 13084
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
| | |||||||| || ||||||||||| || || || || ||||| || || ||
Sbjct 13085 AGCTGTCCGGTATTCCCCCCGCTCCTCGTGGTGTTCCTCAGATCGAAGTCACCTTTGACG 13144
Query 552559 TCGATGCCAATGGAATTTTGAATGT 552583
| |||||||| || ||| | || ||
Sbjct 13145 TTGATGCCAACGGTATTCTCAACGT 13169
Score = 159 bits (176), Expect = 3e-33
Identities = 559/865 (65%), Gaps = 16/865 (2%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 4164159 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 4164100
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 4164099 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 4164042
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 4164041 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 4163984
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| | ||||| ||| |||| || |
Sbjct 4163983 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATC 4163924
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 4163923 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCG 4163864
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || |||| ||||| || | || |
Sbjct 4163863 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCAGTTGAGAAGGTCCT 4163804
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || ||| | || ||||| ||||||||||| || ||
Sbjct 4163803 GAAGGACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 4163744
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || ||| | | ||
Sbjct 4163743 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAA 4163687
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 4163686 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 4163627
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | || ||| |||| || |
Sbjct 4163626 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTTGACGTTGCTCCCCTTT 4163568
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
||||||| | || || | ||| ||| ||||||| || || ||| |||| | ||||
Sbjct 4163567 CTCTTGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTA 4163508
Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438
| || || || ||| || || || || | || || || ||| ||| |
Sbjct 4163507 TCCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTGA 4163448
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
|||| | ||||| || || || || || ||||| || ||||||| |||
Sbjct 4163447 TTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGATAACAACATCCTTGGTAAGTTTG 4163388
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
| | |||||||| || ||||||||||| || || || || ||||| || || ||
Sbjct 4163387 AGCTGTCCGGTATTCCCCCCGCTCCTCGTGGTGTTCCTCAGATCGAAGTCACCTTTGACG 4163328
Query 552559 TCGATGCCAATGGAATTTTGAATGT 552583
| |||||||| || ||| | || ||
Sbjct 4163327 TTGATGCCAACGGTATTCTCAACGT 4163303
>seq4
Length=3629463
Score = 159 bits (176), Expect = 3e-33
Identities = 559/865 (65%), Gaps = 16/865 (2%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 3624838 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 3624779
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 3624778 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 3624721
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 3624720 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 3624663
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| | ||||| ||| |||| || |
Sbjct 3624662 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATC 3624603
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 3624602 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCG 3624543
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || |||| ||||| || | || |
Sbjct 3624542 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCAGTTGAGAAGGTCCT 3624483
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || ||| | || ||||| ||||||||||| || ||
Sbjct 3624482 GAAGGACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 3624423
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || ||| | | ||
Sbjct 3624422 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAA 3624366
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 3624365 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 3624306
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | || ||| |||| || |
Sbjct 3624305 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTTGACGTTGCTCCCCTTT 3624247
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
||||||| | || || | ||| ||| ||||||| || || ||| |||| | ||||
Sbjct 3624246 CTCTTGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTA 3624187
Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438
| || || || ||| || || || || | || || || ||| ||| |
Sbjct 3624186 TCCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTGA 3624127
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
|||| | ||||| || || || || || ||||| || ||||||| |||
Sbjct 3624126 TTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGATAACAACATCCTTGGTAAGTTTG 3624067
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
| | |||||||| || ||||||||||| || || || || ||||| || || ||
Sbjct 3624066 AGCTGTCCGGTATTCCCCCCGCTCCTCGTGGTGTTCCTCAGATCGAAGTCACCTTTGACG 3624007
Query 552559 TCGATGCCAATGGAATTTTGAATGT 552583
| |||||||| || ||| | || ||
Sbjct 3624006 TTGATGCCAACGGTATTCTCAACGT 3623982
>seq1
Length=2257857
Score = 159 bits (176), Expect = 3e-33
Identities = 559/865 (65%), Gaps = 16/865 (2%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 2253270 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 2253211
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 2253210 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 2253153
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 2253152 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 2253095
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| | ||||| ||| |||| || |
Sbjct 2253094 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATC 2253035
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 2253034 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCG 2252975
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || |||| ||||| || | || |
Sbjct 2252974 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCAGTTGAGAAGGTCCT 2252915
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || ||| | || ||||| ||||||||||| || ||
Sbjct 2252914 GAAGGACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 2252855
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || ||| | | ||
Sbjct 2252854 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAA 2252798
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 2252797 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 2252738
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | || ||| |||| || |
Sbjct 2252737 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTTGACGTTGCTCCCCTTT 2252679
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
||||||| | || || | ||| ||| ||||||| || || ||| |||| | ||||
Sbjct 2252678 CTCTTGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTA 2252619
Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438
| || || || ||| || || || || | || || || ||| ||| |
Sbjct 2252618 TCCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTGA 2252559
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
|||| | ||||| || || || || || ||||| || ||||||| |||
Sbjct 2252558 TTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGATAACAACATCCTTGGTAAGTTTG 2252499
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
| | |||||||| || ||||||||||| || || || || ||||| || || ||
Sbjct 2252498 AGCTGTCCGGTATTCCCCCCGCTCCTCGTGGTGTTCCTCAGATCGAAGTCACCTTTGACG 2252439
Query 552559 TCGATGCCAATGGAATTTTGAATGT 552583
| |||||||| || ||| | || ||
Sbjct 2252438 TTGATGCCAACGGTATTCTCAACGT 2252414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295629808430
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