Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 264 2e-65
seq6 260 3e-64
>seq2
Length=3044971
Score = 264 bits (292), Expect = 2e-65
Identities = 574/858 (67%), Gaps = 20/858 (2%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| |||||||||||||||| | ||| |||||| || || |||||||||
Sbjct 506950 GAAATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGAT 506891
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|| | |||||||||| | |||| | | ||| |||| ||| || |||
Sbjct 506890 CTTGGAAAGGACATGGGTGACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATC 506831
Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
| |||| | ||||||||||| ||||| || ||||| || |||||||| ||| |||
Sbjct 506830 TCCCACGTTCTCGCATTCTTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAG 506771
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
||||| || | || |||||| | ||||||||||| |||||||| ||||||||
Sbjct 506770 CGATTCTCCGGCGAGGTGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATG 506711
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767
|| || || | ||||| ||| || | ||| ||||| || ||||| | |||
Sbjct 506710 ATGGAGAACATCCACTCCGAGACCTACTC---GCTGCTGATCGACACATACATCAAGGAC 506654
Query 25768 GTCGCCGAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825
| | |||| || | ||||| ||||||||| ||| ||| ||||||||| |
Sbjct 506653 --CCCAAAGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAA 506596
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTG 25884
|||| |||||| | ||||||||| | | | || | | || ||||| ||||| ||
Sbjct 506595 AGGCCGACTGGGCCCTCAAGTGGATCTCCGACGA-AGAGTCCACCTTTGGAGAGCGACTC 506537
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||||||| || || ||||||||||| ||| ||| || || || |||||||||||
Sbjct 506536 ATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGG 506477
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || |||||| || || ||| ||||||||||||||| | | |||
Sbjct 506476 CTCAAGAAGCGAGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 506417
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
|||||||| |||| || |||||||||||||| | | || ||| | || |||
Sbjct 506416 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCTCG---CACCTTGAGAACCGACCC 506360
Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124
|| | ||| || | |||| |||||||| | |||||| ||||||| |
Sbjct 506359 TCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTT 506300
Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184
| || |||||| || || ||| |||| |||||
Sbjct 506299 ACTGACGCTCTGCCCTGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATC 506240
Query 26185 GAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243
|||| ||| || |||| |||||| || | || || | ||| | || | | |
Sbjct 506239 GAGTTTGTCGCTGACCGTCTGCTAGTTGC-TCTCGGTAACTCCAAGGTGTATAACTCCAC 506181
Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303
||||| |||||||| ||||| ||||| || ||| || ||||||||||| || || ||
Sbjct 506180 CAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAA 506121
Query 26304 GAGGGTCGGCGACTATCA 26321
| | || |||||| ||
Sbjct 506120 GCGAGTGTCCGACTACCA 506103
>seq6
Length=4002965
Score = 260 bits (288), Expect = 3e-64
Identities = 936/1444 (65%), Gaps = 31/1444 (2%)
Strand=Plus/Minus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486
|||||||||||||||| |||||| ||||||| |||||||||| || || |
Sbjct 3934658 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCAAATG 3934599
Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546
| | || || | ||| ||||||||| ||||| || || | | | ||||| | ||
Sbjct 3934598 GGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAGAGCAATGGGTCGGT 3934539
Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
||| | |||| || || || || || || || |||| |||||| | | ||
Sbjct 3934538 GTCGCATGTTAGACTTCTTGGCCTCGGGGACCGGGTAGTAGTTTCGGTCGATGATAGCGT 3934479
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
||||||| | ||||| || | | ||| |||||||| | | | | | | | |
Sbjct 3934478 TGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGAAGTCGTAGAACGAGT 3934419
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
| | |||| | ||| ||||||| | || || | | |||||||| || |
Sbjct 3934418 TGGTGTCGTC-TCGAGTA-----ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGA 3934365
Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786
| || ||||| || | |||| || ||||| || ||||| |||| |
Sbjct 3934364 CAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTAGAAGACTTAA 3934305
Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846
| || || |||| || || || ||||| || ||| | ||||||||| ||||| ||||
Sbjct 3934304 TTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGG 3934245
Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCACC 221905
| ||| | ||| ||| | ||||| | || ||| || | ||||| | |
Sbjct 3934244 GGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT-TCTGGGCAGGGATG 3934186
Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965
|| | | || ||||| ||| | | | || || ||| | ||||| |||
Sbjct 3934185 GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCG---TACAGCTGCTTAAACTCATCA 3934129
Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025
|| || | ||||| || || || ||| | ||| |||||||| |||| | |||
Sbjct 3934128 CCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTC 3934069
Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085
| | ||| | || |||||| ||||| ||||||||||| ||| | || || |||| ||
Sbjct 3934068 TGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCT 3934009
Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145
|| ||| ||| |||| ||| || | ||| || | ||||| || || || |||||
Sbjct 3934008 CGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGC 3933949
Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC-AT 222204
|| ||||| || || | || | || || |||||||||||||| |||||||| || ||
Sbjct 3933948 CAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTAT 3933889
Query 222205 CCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | | | ||| ||| || || | || || | |||||||| ||||| |
Sbjct 3933888 CGGG--CGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAG 3933831
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGG 222323
| || |||||| | || || | | ||| | ||||| |||||||| ||||
Sbjct 3933830 TTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGG 3933771
Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383
| || || |||| || ||| | ||||| || || |||||| || || ||||| |
Sbjct 3933770 CAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGT 3933711
Query 222384 CCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACA 222443
|||| | ||| | || ||||| ||||||||||||| | || | | |||||| | |
Sbjct 3933710 CCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGA 3933651
Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTC 222503
| ||||| ||||| || ||||| | |||||| | ||| ||||| | | | |
Sbjct 3933650 GAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCC 3933591
Query 222504 TGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT 222563
||| |||||||| ||||| || | | | || |||| ||| | ||||| | ||
Sbjct 3933590 GGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCT 3933531
Query 222564 ---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
| |||| ||| ||| || | |||||||| | | ||||| |||||||| ||||
Sbjct 3933530 CGGCAACAGCACCGTTG--ACTCG-CAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAA 3933474
Query 222621 AGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGAC-TTG 222676
|||||||| |||| ||||||| | ||| | | |||| ||| ||||| || | |||
Sbjct 3933473 AGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCGCCGTTGAGCTCGTCGGCGTTG 3933415
Query 222677 TGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCG 222736
|| ||| | ||| | | || || || | ||| | || || ||| | |
Sbjct 3933414 GCCTGCACGGT---GTCGTACAGCTCCTTGGAGACCATGGGCGAGTGCTTCTTGTTTCGG 3933358
Query 222737 GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTT 222795
||||| |||| |||||||| | | | | | |||||| | || | ||||||||
Sbjct 3933357 GGGTTCACGTAGTGGTACAAGTCGTAAACCACCTGCGAGAACTGCTTCTTG-GTCTGCTT 3933299
Query 222796 GTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGT 222855
||||| || ||||| ||||| || | |||| || |||||||||| |||| |||||
Sbjct 3933298 ATGCAGGTTGGACACAGCGATTCGGGCAGCCAGAATCGCATAGTCAGGATGCAGAGTGGT 3933239
Query 222856 CATG 222859
||||
Sbjct 3933238 CATG 3933235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844718726080
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