Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 1e-30
seq4 150 1e-30
seq1 150 1e-30
>seq5
Length=4198534
Score = 150 bits (166), Expect = 1e-30
Identities = 369/552 (67%), Gaps = 8/552 (1%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || || |
Sbjct 11722 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCCAA-TGACAG 11780
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||| || || || | ||| | |||||
Sbjct 11781 AGTCGAAATCATCGCCAATGACCAGGGAAACAGAACCACTCCCTCGTTTGTGGCCTTTAC 11840
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || ||||| || |||| ||
Sbjct 11841 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAACCCTGCAAA 11900
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || ||||||| || || || || || | |||||
Sbjct 11901 CACAGTCTTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAGGTCCAGAA 11960
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| || | || || ||| | || | | ||| || || | || || |
Sbjct 11961 TGACGCCAAGCACTTCCCCTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 12020
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
||| || | || ||||| || || | || ||| | || ||||| ||| | |
Sbjct 12021 CGAATTCAAG--GGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCTTCCATGATCCTC 12078
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
|||| |||||| |||| || ||| ||| || ||| | | || | || || || ||
Sbjct 12079 ACCAAGATGAAAGAAACTGCTGAGGG-ATACCTCGGAACAAAGGTGAACGACGCTGTCAT 12137
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| ||||| || ||||||||||| || || || || || || || || ||
Sbjct 12138 TACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGTCTTAT 12197
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| |||||| | ||||| || || || || || ||||| |||| || ||
Sbjct 12198 TGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCCTACGG 12257
Query 474865 TCTTGATAAGAA 474876
||| ||||||||
Sbjct 12258 TCTCGATAAGAA 12269
Score = 150 bits (166), Expect = 1e-30
Identities = 369/552 (67%), Gaps = 8/552 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || || |
Sbjct 4164750 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCCAA-TGACAG 4164692
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||| || || || | ||| | |||||
Sbjct 4164691 AGTCGAAATCATCGCCAATGACCAGGGAAACAGAACCACTCCCTCGTTTGTGGCCTTTAC 4164632
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || ||||| || |||| ||
Sbjct 4164631 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAACCCTGCAAA 4164572
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || ||||||| || || || || || | |||||
Sbjct 4164571 CACAGTCTTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAGGTCCAGAA 4164512
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| || | || || ||| | || | | ||| || || | || || |
Sbjct 4164511 TGACGCCAAGCACTTCCCCTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 4164452
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
||| || | || ||||| || || | || ||| | || ||||| ||| | |
Sbjct 4164451 CGAATTCAAG--GGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCTTCCATGATCCTC 4164394
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
|||| |||||| |||| || ||| ||| || ||| | | || | || || || ||
Sbjct 4164393 ACCAAGATGAAAGAAACTGCTGAGGG-ATACCTCGGAACAAAGGTGAACGACGCTGTCAT 4164335
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| ||||| || ||||||||||| || || || || || || || || ||
Sbjct 4164334 TACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGTCTTAT 4164275
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| |||||| | ||||| || || || || || ||||| |||| || ||
Sbjct 4164274 TGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCCTACGG 4164215
Query 474865 TCTTGATAAGAA 474876
||| ||||||||
Sbjct 4164214 TCTCGATAAGAA 4164203
>seq4
Length=3629463
Score = 150 bits (166), Expect = 1e-30
Identities = 369/552 (67%), Gaps = 8/552 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || || |
Sbjct 3625429 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCCAA-TGACAG 3625371
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||| || || || | ||| | |||||
Sbjct 3625370 AGTCGAAATCATCGCCAATGACCAGGGAAACAGAACCACTCCCTCGTTTGTGGCCTTTAC 3625311
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || ||||| || |||| ||
Sbjct 3625310 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAACCCTGCAAA 3625251
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || ||||||| || || || || || | |||||
Sbjct 3625250 CACAGTCTTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAGGTCCAGAA 3625191
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| || | || || ||| | || | | ||| || || | || || |
Sbjct 3625190 TGACGCCAAGCACTTCCCCTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 3625131
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
||| || | || ||||| || || | || ||| | || ||||| ||| | |
Sbjct 3625130 CGAATTCAAG--GGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCTTCCATGATCCTC 3625073
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
|||| |||||| |||| || ||| ||| || ||| | | || | || || || ||
Sbjct 3625072 ACCAAGATGAAAGAAACTGCTGAGGG-ATACCTCGGAACAAAGGTGAACGACGCTGTCAT 3625014
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| ||||| || ||||||||||| || || || || || || || || ||
Sbjct 3625013 TACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGTCTTAT 3624954
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| |||||| | ||||| || || || || || ||||| |||| || ||
Sbjct 3624953 TGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCCTACGG 3624894
Query 474865 TCTTGATAAGAA 474876
||| ||||||||
Sbjct 3624893 TCTCGATAAGAA 3624882
>seq1
Length=2257857
Score = 150 bits (166), Expect = 1e-30
Identities = 369/552 (67%), Gaps = 8/552 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || || |
Sbjct 2253861 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCCAA-TGACAG 2253803
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||| || || || | ||| | |||||
Sbjct 2253802 AGTCGAAATCATCGCCAATGACCAGGGAAACAGAACCACTCCCTCGTTTGTGGCCTTTAC 2253743
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || ||||| || |||| ||
Sbjct 2253742 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAACCCTGCAAA 2253683
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || ||||||| || || || || || | |||||
Sbjct 2253682 CACAGTCTTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAGGTCCAGAA 2253623
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| || | || || ||| | || | | ||| || || | || || |
Sbjct 2253622 TGACGCCAAGCACTTCCCCTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 2253563
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
||| || | || ||||| || || | || ||| | || ||||| ||| | |
Sbjct 2253562 CGAATTCAAG--GGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCTTCCATGATCCTC 2253505
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
|||| |||||| |||| || ||| ||| || ||| | | || | || || || ||
Sbjct 2253504 ACCAAGATGAAAGAAACTGCTGAGGG-ATACCTCGGAACAAAGGTGAACGACGCTGTCAT 2253446
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| ||||| || ||||||||||| || || || || || || || || ||
Sbjct 2253445 TACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGTCTTAT 2253386
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| |||||| | ||||| || || || || || ||||| |||| || ||
Sbjct 2253385 TGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCCTACGG 2253326
Query 474865 TCTTGATAAGAA 474876
||| ||||||||
Sbjct 2253325 TCTCGATAAGAA 2253314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178899736036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |