Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 145 9e-30
seq4 87.8 2e-12
>seq2
Length=3044971
Score = 145 bits (160), Expect = 9e-30
Identities = 348/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Minus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|||||| | || | || || || |||| ||||| | ||||| | || ||| | |
Sbjct 506626 GCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCAAGTGGATCTCC 506567
Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114
|| ||| || | |||| | ||||| || |||| ||||| || ||||| |||||
Sbjct 506566 GACGAAGAGTC-CACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCGAGGGCATCTT 506508
Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174
||||||||| || ||| | | || | ||| | |||||||| ||||||||||| |||||
Sbjct 506507 CTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCT 506448
Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234
|||||| || || || || |||||||| |||||||| ||| || ||||||
Sbjct 506447 CACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACTTTGCCTGCCT 506388
Query 65235 GCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293
||| ||| | || ||| | || ||||| | | | | | | | | | || | |
Sbjct 506387 GCTTTTCTCGCACCTTGAG-AACCGACCCTCAAAGAAGATTGTTGAGGACGTCATTGTCG 506329
Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353
|||| |||| || ||| | | |||| | ||||| || || ||| ||| | ||||
Sbjct 506328 AGGCTGTTGGCATCGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTGGTCTGCTTGGTA 506269
Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413
||||| | || ||||| | ||||||| |||| ||| | || ||||| || ||
Sbjct 506268 TGAACGCCAAGCTGATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTGCT------AG 506215
Query 65414 TTG----GGGTGCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACA 65467
||| ||| | || | | | ||| | | || || || ||||| ||||| ||||
Sbjct 506214 TTGCTCTCGGTAACTCCAAGGTGTATAACTCCACCAACCCCTTCGACTTCATGGAGAACA 506155
Query 65468 TTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507
| || | || ||||||||||| || |||||||||||
Sbjct 506154 TCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAAGCGAGT 506115
>seq4
Length=3629463
Score = 87.8 bits (96), Expect = 2e-12
Identities = 200/294 (68%), Gaps = 8/294 (3%)
Strand=Plus/Plus
Query 13605 AGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCT 13664
|||| || |||||| |||| ||||| || || || | ||| | ||| || || || |
Sbjct 3120211 AGTGCACGCTCATTCTCACTGAGGGAGACTCCGCCATGACCATGGCGAACGCTGGACTGT 3120270
Query 13665 CTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAA-ATGTAAGAATGTT 13723
|||| ||||||| || | || || | || || || || ||||| ||| || ||
Sbjct 3120271 CTGTGATTGGTCGAGAACGATATGGCGCCTTTCCTCTGCGTGGTAAGATGCTC-AACGTG 3120329
Query 13724 CGGGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATC 13783
|| || || || || ||| ||| ||| ||| || | | | ||||| |||||
Sbjct 3120330 CGAGAGGCGTCCACGGACCAGATCATGAAGAACGCCGAGATCCAGGCTATCAAGGAGATC 3120389
Query 13784 CTTGGTCTTCA--ACAAGGAAAAGACTAC-CAAGATGTTTCTGAACTTCGCTATGGTCGT 13840
| ||||| || ||||| || ||||| | || || || || || || || | |
Sbjct 3120390 ATCGGTCTGCAGCACAAG--AAGCACTACACGAGCTGCAAG-GACCTGCGATACGGGCAT 3120446
Query 13841 CTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894
|| ||||| ||||| ||| ||| |||||||||| |||||||||||||| |||
Sbjct 3120447 CTGATGATCATGACCGATCAGGATCATGATGGTTCCCACATCAAGGGTCTGATC 3120500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569547800160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |