Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 122 3e-22 >seq2 Length=3044971 Score = 122 bits (134), Expect = 3e-22 Identities = 401/607 (66%), Gaps = 21/607 (3%) Strand=Plus/Minus Query 443271 CGGTTCGTCTTGTTCCCCGTTCAGCATCCCGACATCTACGACATGTACAA-ACGACAAGT 443329 ||||| || | |||||| | ||| | | ||| |||| | |||||||| | | | | Sbjct 506980 CGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTACAAGAAGGCC-GA 506922 Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 |||| || ||||| |||||||||||||| |||||| ||| || ||| | || Sbjct 506921 GGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGTGACTGGGA-GA 506863 Query 443390 AC-GACTATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCAC 443445 || |||| | | |||| || ||||||| | | | | || |||||||| Sbjct 506862 ACAGACTCAACAACGATGAGCGG---TTCTTCATCTCCCACGTTCTCGCATTCTTTGCTG 506806 Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505 | |||||||||||| ||||| ||||| ||| |||| || ||| | | Sbjct 506805 CCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTGCAGGCCC 506746 Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565 |||||||| | |||||||| ||||| | ||||||||||| ||| ||||| || Sbjct 506745 CCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 506686 Query 443566 ACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCA 443624 || | | ||||| | ||| || || || || | || |||| || | || ||| Sbjct 506685 ACTCGCTGCTGATCGACACA-TACATC--AAGGACCCCAAAGAGCGAACCTACCTGTTCA 506629 Query 443625 TCGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680 || || ||||| || |||||| ||||| | |||||| ||||| || Sbjct 506628 ACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCAAGTGGATCT 506569 Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740 | |||| | | || || ||| | |||||||| | || ||||| | ||||| || | Sbjct 506568 CCGACGA-AGAGTC-CACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCGAGGGCAT 506511 Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800 || || |||| |||| ||||||||||||||| | || ||||| || || |||| | Sbjct 506510 CTTCTTCTCCGGCT-CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTG 506452 Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860 | || ||||| ||||| || ||| || ||||||||| |||| ||||| |||| Sbjct 506451 GCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACTTTGCCT 506392 Query 443861 GTCTTCT 443867 | || || Sbjct 506391 GCCTGCT 506385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335857546115