Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq23 150 2e-31
>seq23
Length=2267247
Score = 150 bits (166), Expect = 2e-31
Identities = 458/705 (65%), Gaps = 12/705 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||||||||| || ||||| | ||||| || ||||||
Sbjct 1857812 TGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCC 1857753
Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795
||||| || || || || || | | | | || |||| || || | | | |
Sbjct 1857752 ATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGA 1857693
Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855
| || || ||||| || || || |||||||| | | | |||||| || | ||||
Sbjct 1857692 CGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCA 1857633
Query 16856 ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--TAC 16913
|| ||||| || || | || ||||| || |||| || || ||| | | |
Sbjct 1857632 CAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCC 1857573
Query 16914 TAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973
| |||| | || || ||| | | ||| || || | ||| || || || |
Sbjct 1857572 T--CAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGT 1857515
Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033
| || | |||||||||| | ||| || ||||| || || || | || |||||
Sbjct 1857514 CAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGA 1857455
Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093
||||| ||||| | ||| || || | |||||| || || || ||||| || |||||||
Sbjct 1857454 GACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGA 1857395
Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153
||| ||||| || || | ||| || | | || | |||| || ||||| ||
Sbjct 1857394 CGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGA 1857335
Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAAT 17209
| |||| ||||| |||| ||| ||||| || || || ||||| || || ||
Sbjct 1857334 GGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGG 1857275
Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269
||| || ||| |||| | || || || ||||| || || ||| | ||||||
Sbjct 1857274 TTCGCTCTTTGG----GGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAG 1857219
Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329
|| ||||||||||| ||||| || ||||| ||||| ||| || | || ||
Sbjct 1857218 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACC 1857159
Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374
|| || ||||||| || | || || ||||| ||||| ||||||
Sbjct 1857158 TCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCG 1857114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545412389720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |