Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 >seq23 Length=2267247 Score = 107 bits (118), Expect = 2e-18 Identities = 285/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || ||||| || || || ||||||| | ||| || |||||||| || || Sbjct 1857527 AGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTG 1857468 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| ||||| ||||| | |||||| || | || || || || || ||| Sbjct 1857467 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 1857408 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || || ||||| || | ||||| || || | ||| || | | || | |||| | Sbjct 1857407 AAGATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCG 1857348 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 ||||| || | |||| ||||| |||| || || || || || || ||||| Sbjct 1857347 GAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCG 1857288 Query 16439 TTAAACAATT----TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || |||| | || || ||| | || | || || || || ||||| | Sbjct 1857287 TTGAACAGGTAGGTTCGCTCTTTGGGG----TCCTTGATGTATGTGTCGATCAGCAGCGA 1857232 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| | || ||||| |||||||| || ||||| || || |||||||| ||||| Sbjct 1857231 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTC 1857172 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | || || || || | ||||| || |||||||||| || ||||||||||| Sbjct 1857171 GGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGA 1857112 Query 16615 TGCAGCAAAAAACGC 16629 |||||||| || || Sbjct 1857111 GGCAGCAAAGAATGC 1857097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414214612280