Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 8e-15 >seq13 Length=841849 Score = 95.1 bits (104), Expect = 8e-15 Identities = 135/184 (73%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 |||||||| | || |||| |||||||||||||||||||| ||||| ||||| || || Sbjct 377131 ACGGTCATACGCGAAGGAATGGCGTGGGGGTTGATGATGATATCGGGGACCACTCCCTCG 377190 Query 71476 TTGTCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCG 71533 | ||| ||||||||||| || ||| | | || | || || ||||| || ||| Sbjct 377191 GCGGAGAACGGCATGTCCTCATGTCGGT-ACGTCA-CACCAATGGTACCCTTCTG-TCCG 377247 Query 71534 TGA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTG 71592 ||| |||||||||||||| || |||| ||| | ||| ||| | || | |||||| Sbjct 377248 TGACGCGACGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCGCACCTTA 377307 Query 71593 ACGA 71596 |||| Sbjct 377308 ACGA 377311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764680267816