Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq23 187 3e-42
seq29 136 5e-27
seq13 100 4e-16
>seq23
Length=2267247
Score = 187 bits (206), Expect = 3e-42
Identities = 389/574 (68%), Gaps = 8/574 (1%)
Strand=Plus/Minus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
||||||||||||||||| || || |||||||| || ||||| || ||||| || ||
Sbjct 1857510 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACC 1857451
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
||||| || ||||| || ||||| ||||| || || || |||||||| || || || ||
Sbjct 1857450 TCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGC 1857391
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCT--GTCATGTATCCACTTTTGAGC 33494
||||||||||| |||| ||||||| | || | || ||| |||||||| | ||
Sbjct 1857390 GGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGC 1857331
Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554
||| |||||||| || || | || || || || || ||||| || || || ||| ||
Sbjct 1857330 CCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG 1857271
Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614
|| || || || | || || ||||||| || || | || || || |||||
Sbjct 1857270 CTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTT 1857211
Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674
|| || ||||| || |||||||| || | ||||||| ||| || || |
Sbjct 1857210 CTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGA 1857151
Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734
||||| || ||| || || || || || ||||| ||| ||||| || || | ||
Sbjct 1857150 GAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAAC 1857091
Query 33735 ATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT---TTATTCCAATCATTGATATCTT 33790
|| || || | || || | |||| ||| || | ||| ||| || || |
Sbjct 1857090 GTGGGAGATGAAGAACCGCTCATC-GTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT 1857032
Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850
| | ||| | || || ||||||| || || ||||| ||||| || ||||| | ||
Sbjct 1857031 TTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC 1856972
Query 33851 AGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|||| || | || ||||| ||||| | |||||
Sbjct 1856971 AGATTTCGTGGTACTGGATGGGGAAGAGCACAAA 1856938
>seq29
Length=2752704
Score = 136 bits (150), Expect = 5e-27
Identities = 451/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Plus
Query 63141 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 63200
||||| || || | || | ||| | || || || || | || ||||||| | |||
Sbjct 58002 AACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCAT 58061
Query 63201 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63260
|| ||| | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 58062 TCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGG 58121
Query 63261 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63320
|||| || || | || || ||||| |||||| || ||| |||| | | |||
Sbjct 58122 TCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATA 58181
Query 63321 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63380
|| ||||| || || | ||| || || | | ||||| || ||||| |||||||||
Sbjct 58182 TCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGA 58241
Query 63381 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATA 63440
|| | ||||| |||||||| ||||| || | || ||| || | |||||||| || |
Sbjct 58242 TCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTT 58301
Query 63441 CCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63500
|| || || || | || ||| ||| | || || || || || || ||||| ||
Sbjct 58302 CCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATA 58361
Query 63501 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATG 63560
|| || || || || || | || || ||| | || || ||||| || || |||
Sbjct 58362 CCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATG 58421
Query 63561 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63620
|| || ||||||| | || ||||| ||||| || | | |||||| ||
Sbjct 58422 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCG 58481
Query 63621 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTC 63679
|| | | || || |||||||| || || | || | ||| | ||| ||||| |||||
Sbjct 58482 TTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG-TTGTAGGTCTC 58540
Query 63680 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63739
||| || | | || | || || || || | ||| ||||| | ||| || ||
Sbjct 58541 AATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTG 58600
Query 63740 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63799
|||| || | | ||| | | || || ||| | | |||| || || ||
Sbjct 58601 GGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGGGTCTTGAA 58660
Query 63800 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||||| |||||||| | |||||||| ||||| | |||
Sbjct 58661 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 58699
>seq13
Length=841849
Score = 100 bits (110), Expect = 4e-16
Identities = 461/713 (65%), Gaps = 30/713 (4%)
Strand=Plus/Minus
Query 63135 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATTCATCCGGACACATCAA 63193
|| ||||| || ||||||||||||| | ||| || || | || | ||||| | |
Sbjct 422194 CGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCCTTTCTG-GGACAGAAAAG 422136
Query 63194 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63253
||||||| | || ||| || ||| |||||| || ||||| | ||| | ||
Sbjct 422135 AGACCACTTTTCGCCATTCTCGACTTTGCGCATAAACAGGTCAGGCACCCATAAGGCGTA 422076
Query 63254 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAA 63310
|| || || | || || || ||||||| || || ||||| |||| |||||
Sbjct 422075 GAAGAGGTCACGGGCTCGATTTTCCTCGGCACC---ATGGTTTTTGCGCAGATTCAGGAA 422019
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
||| ||| || | |||||| || ||||| || | || | |||| || ||||||||
Sbjct 422018 ATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAACGCTCCTGGACGTTTGTT 421959
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|||||| || || | ||| | ||| ||||| || | ||||| | ||| |||| || ||
Sbjct 421958 TCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTGAGCATAGGAACGATTCC 421899
Query 63431 GTTTGATATACCATTGGTACCGGAGAT-ATAGCTTCCACTGGCACGAATATTACTAAT-T 63488
| ||| | || | | || | || | ||| ||| |||| | ||| || || |
Sbjct 421898 GGAGGATCTTCCTTGAGACCCAGTAATGAGAGC-TCCCTTGGCTCTAATGTTGTGGATAT 421840
Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTGTCATA 63547
| || || || || || || |||| |||||| || || |||||| | |||||| ||
Sbjct 421839 GCAAG-CCGATACCTCCGGCGGTTTTGGAGATTTGGGCACA-CGTTTTGAGCGTGTCGTA 421782
Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607
||| || || ||| || | |||| | || |||||| || | |||| |
Sbjct 421781 GATGCCGTCGATGGAGTCTGCTGCCATGGCCACCAGGAAACAGGACGAAAGTTGGCCCTG 421722
Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TA 63666
||||| ||||| || || |||||||| || || || || ||||| || | |
Sbjct 421721 GGGGGTTCCTGCATTGAACAAAGTAGGAGACGCATGTGTGAA----TTTTCTGAGCGACA 421666
Query 63667 GA---TTGTACGTCTCAATAGC--TGAGTCTAT-ATC-CCATTGATGAATTCCTACTGCG 63719
|| | ||| || || | ||| ||| ||| |||| |||| || | ||
Sbjct 421665 GAGCCTGGTAGGTTTCGCGCACCTTGAAAATATCATCTCCATGGATG----CCCAGGGCC 421610
Query 63720 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63779
|| ||||| ||||| || ||||||| || || | || | | | |||| |||||
Sbjct 421609 ACTCGCATCAACATATGTTGAGGTCGCTCCACCACGTTTCCGCCAACTCTCAATAAGTAT 421550
Query 63780 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63832
|| || |||| || || || ||||| ||| ||| | | |||||| | |||
Sbjct 421549 GACTTCTCCAGGGTCTTGAATCCAAAGTAGGAGTAAGTCATGTCTCGGTAGTA 421497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946974181640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |