Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq29 289 7e-73 seq13 138 3e-27 >seq29 Length=2752704 Score = 289 bits (320), Expect = 7e-73 Identities = 1155/1792 (64%), Gaps = 56/1792 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| | | ||||| || |||| |||| | ||| || || || || Sbjct 58657 AAGACCCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCTGTTGCCGAGCGACCCCAA 58598 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | |||||||| || | ||| || ||||| Sbjct 58597 CAGATGATCATGCGAGTCTCTGTCGGTATCCACGGCGACAACATTGCCCGGGCCATTGAG 58538 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || | || || ||| ||| ||||| ||||| | || || | ||||| Sbjct 58537 ACCTACAAC--TATATGT-CTCAGAAGTACTTCACTCACGCTTCCCCCACTCTCTACAAC 58481 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || ||||||| | || |||||||| || || || ||| | || ||||||||||| ||| Sbjct 58480 GCCGGAACTCCCCAGCCTCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 58421 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||| || |||| || || || || | |||||||| ||||||||| ||| ||||| Sbjct 58420 ATCGACGGCATCTACGATACCCTCAAAACCTGTGCTCTGATTTCCAAGTCTGCCGGCGGT 58361 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755 || ||| | || |||||||| | || || || | | |||||| || || || Sbjct 58360 ATCGGTCTGTCTATCCACAACATCCGAGCTACTG-GCTCCTACATTGCTGGAACTAACGG 58302 Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815 | ||| || || | || |||||||| ||||| | | |||| || || | ||||| || Sbjct 58301 AACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTATAACAACACCGCCCGATACGTTGA 58242 Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875 ||||| || ||||| || || ||||| ||||| || ||||| || | ||| Sbjct 58241 TCAGGGAGGCAACAAGCGACCTGGTGCCTTTGCAATGTACCTTGAGCCCTGGCACGACGA 58182 Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935 ||| || ||||| ||||| || || ||| ||||| || || | || || || || Sbjct 58181 TATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAAGAGATTCGAGCCCGAGA 58122 Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA--- 363992 |||||| || || ||| | | |||| || ||| |||| || || |||| || Sbjct 58121 CCTGTTCCTGGCTCTGTGGATCCCCGACCTGTTCATGGAGCGAGTCGA-GCAG--AACGC 58065 Query 363993 -GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACG 364051 ||| ||| | || | ||||| |||| || || |||||| ||| || | ||||| | Sbjct 58064 TGAA-TGGACCCTGATGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTATGGTGATG 58006 Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACAATTCCC 364110 | | | || ||||| |||| || |||||| |||| || || || || Sbjct 58005 AGTTTAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCT 57947 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||| | || | |||| ||| | || | |||| ||| Sbjct 57946 GCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGCAACCCCTTCATG 57887 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| || || |||||||| |||||||||||| || |||| || |||||| || Sbjct 57886 CTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACAATTAAGTCT 57827 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 ||||| || |||||| | || ||| | |||| || ||| || || || ||| Sbjct 57826 TCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAAC 57767 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338 || || || ||||| || || | ||||| | ||| | || || | ||| Sbjct 57766 CTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGAGACGACACCAACTCGTTCTACGAC 57707 Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 | || | || | ||| | || | |||| | | | || ||| || | |||| Sbjct 57706 TTCAAGAAGCTGCACGACATTGCCAAGGTCATTGTGC--GAAACCTCAACGCTATCATCG 57649 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || || || || || | || || ||| || ||||| ||||| || || || |||| Sbjct 57648 ACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAGTCTAACATGCGACACCGACCCATTG 57589 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTGATTC 364514 ||| ||||| ||||| || || ||| || ||| |||| | || | ||||||| || Sbjct 57588 CTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATG--GCTCTACGACTCCCATTTGAGTC 57531 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || || | ||||||| || || || || | || | Sbjct 57530 CGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCTGTCGA 57471 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 || || | || |||| | || ||| || | |||| |||||| Sbjct 57470 AGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGCTCCCCTGC 57411 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || |||| | ||||||| ||||| ||||| || || || || | | ||| | || Sbjct 57410 CTCCAAGGGTGACCTCCAGTTCGATCTCTGGAACGTGACTCCTTCCGAGCTGTGGGAGTG 57351 Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCC 364754 ||| || |||| | | |||| ||||| || ||||| || | || || Sbjct 57350 GGACGATCTCAAGGCCAAGATCATGAAGACTGGTATGCGAAACTCGCTGTTGGTCGCTCC 57291 Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814 ||||||||| || || ||| | ||||| || || ||| ||||||||||| || | || Sbjct 57290 CATGCCCACTGCCTCCACTTCCCAGATTCTTGGTTTCAATGAGTGCTTCGAGCCCTACAC 57231 Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874 ||| |||| || || || |||||| | || ||||| | | | || || | || Sbjct 57230 TTCCAACATTTACTCTCGACGAGTTCTTGCTGGTGAATTCCAGATTGTCAACCCCTGGCT 57171 Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 ||||||| || || || |||||| || | |||||||||| || | || Sbjct 57170 GCTCAAGGACCTGGTTGAGGTTGGCCTGTGGAACGAGACCATGAAGAACCGAATTGTTGC 57111 Query 364935 CGCTAATGGTTCTGTGCAGAACAT-TCCAGGATT-TCCAGAAGATCTGAAGCCTATTTAC 364992 | || || || ||||||||||| ||| ||| |||| | ||| ||| | ||| Sbjct 57110 TGACAACGGATCCGTGCAGAACATCCCCAACATTCCCCAGGAAATC--AAGGACCTGTAC 57053 Query 364993 AAAACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCG 365045 || ||||| ||||| ||||| | ||||| ||||||| ||||| | |||||| Sbjct 57052 AAGACCGTGTGGGAGATTTCTCAGAAGCGAA---TCATTGAGATGGCCGCTGACCGATCC 56996 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105 | | | || | | ||| ||||| | ||| | ||| | | || ||| | Sbjct 56995 CCCTTCATTGACCAGTC----TCAGTCCCTCAACATTCACATCAAGGACCCTACCATGGG 56940 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 |||||| || |||||||| |||||||| ||||| ||||| ||||||||| Sbjct 56939 CAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGT 56888 >seq13 Length=841849 Score = 138 bits (152), Expect = 3e-27 Identities = 369/557 (66%), Gaps = 18/557 (3%) Strand=Plus/Plus Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 ||||| ||||| | ||||| |||| ||||| ||||||| ||||| || ||| || Sbjct 421905 GTTCCTATGCTCAGAGTGTTCAACAACACTGCTCGGTACGTGGACCAAGGAGGAAACAAA 421964 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 || ||| |||||||| ||||| | ||||| ||||| || ||||| || || || Sbjct 421965 CGTCCAGGAGCGTTTGCAGTGTATTTGGAGCCCTGGCATGCAGACATTTTGGATTTCCTG 422024 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 | || || |||||| || |||||| || || ||||| || ||||| || | Sbjct 422025 AATCTGCGCAAAAACCATGGTGCCGAGGAAAATCGAGCCCGTGACCTCTTCTACGCCTTA 422084 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGC---GTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 ||||| |||||| |||||| ||| || ||| || | || ||||| || || Sbjct 422085 TGGGTGCCTGACCTGTTTATG---CGCAAAGTCGAGAATGGCGAAAAGTGGTCTCTTTTC 422141 Query 364009 TGCCCACACGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-T 364066 || || || || | || |||||| ||||||| ||||| || || | | | | | | Sbjct 422142 TGTCC-CAGAAAGGCCCCAGGTCTGGCCGATGTTTGGGGAGAGGAATTCGAC-CGCAAGT 422199 Query 364067 ACGAAAAGTATGAATCGGAGGGA----AAGGCTCGTAAGACAATTCCCGCACAGAAGCTA 364122 |||| | || || || ||||| | |||| | ||| ||| ||| |||| Sbjct 422200 ACGAGGATTACGAGTCTAAGGGACTTTACAACTCGCAG----ATTGACGCCCAGGAGCTG 422255 Query 364123 TGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGAT 364182 | ||||| || |||||||| |||||| ||| | ||| |||| ||||| Sbjct 422256 TTCAAGGCCATTCTGACGAGCCAGATTGAAACAGGAGGACCTTTCATGCTGTATAAAGAC 422315 Query 364183 TCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGT 364242 || ||| || ||||||||| || |||| || ||||| | | ||| | ||| Sbjct 422316 AGCTGTAACGCGAAATCCAACCAGAAGAACCTCGGCACAATCAAATCGTCCAATTTGTGT 422375 Query 364243 ACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATC 364302 ||||||||| | | ||| | |||| |||||| ||| || || || || || || || Sbjct 422376 ACCGAGATTGTCCAGTACTCGTCTCCTGACGAGGTTGCTGTTTGCAATCTGGCCTCTGTC 422435 Query 364303 GCGCTTCCGGCGTTTGT 364319 || ||||| | |||||| Sbjct 422436 GCCCTTCCTGAGTTTGT 422452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353115722678