Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq29 289 7e-73
seq13 138 3e-27
>seq29
Length=2752704
Score = 289 bits (320), Expect = 7e-73
Identities = 1155/1792 (64%), Gaps = 56/1792 (3%)
Strand=Plus/Minus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| ||||| | | ||||| || |||| |||| | ||| || || || ||
Sbjct 58657 AAGACCCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCTGTTGCCGAGCGACCCCAA 58598
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| ||| | ||||| || || | |||||||| || | ||| || |||||
Sbjct 58597 CAGATGATCATGCGAGTCTCTGTCGGTATCCACGGCGACAACATTGCCCGGGCCATTGAG 58538
Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || | || || ||| ||| ||||| ||||| | || || | |||||
Sbjct 58537 ACCTACAAC--TATATGT-CTCAGAAGTACTTCACTCACGCTTCCCCCACTCTCTACAAC 58481
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636
|| ||||||| | || |||||||| || || || ||| | || ||||||||||| |||
Sbjct 58480 GCCGGAACTCCCCAGCCTCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 58421
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
||||| || |||| || || || || | |||||||| ||||||||| ||| |||||
Sbjct 58420 ATCGACGGCATCTACGATACCCTCAAAACCTGTGCTCTGATTTCCAAGTCTGCCGGCGGT 58361
Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGG 363755
|| ||| | || |||||||| | || || || | | |||||| || || ||
Sbjct 58360 ATCGGTCTGTCTATCCACAACATCCGAGCTACTG-GCTCCTACATTGCTGGAACTAACGG 58302
Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815
| ||| || || | || |||||||| ||||| | | |||| || || | ||||| ||
Sbjct 58301 AACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTATAACAACACCGCCCGATACGTTGA 58242
Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875
||||| || ||||| || || ||||| ||||| || ||||| || | |||
Sbjct 58241 TCAGGGAGGCAACAAGCGACCTGGTGCCTTTGCAATGTACCTTGAGCCCTGGCACGACGA 58182
Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935
||| || ||||| ||||| || || ||| ||||| || || | || || || ||
Sbjct 58181 TATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAAGAGATTCGAGCCCGAGA 58122
Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA--- 363992
|||||| || || ||| | | |||| || ||| |||| || || |||| ||
Sbjct 58121 CCTGTTCCTGGCTCTGTGGATCCCCGACCTGTTCATGGAGCGAGTCGA-GCAG--AACGC 58065
Query 363993 -GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACG 364051
||| ||| | || | ||||| |||| || || |||||| ||| || | ||||| |
Sbjct 58064 TGAA-TGGACCCTGATGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTATGGTGATG 58006
Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACAATTCCC 364110
| | | || ||||| |||| || |||||| |||| || || || ||
Sbjct 58005 AGTTTAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCT 57947
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| |||||||| |||| ||| | || | |||| ||| | || | |||| |||
Sbjct 57946 GCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGCAACCCCTTCATG 57887
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
||||||| || || |||||||| |||||||||||| || |||| || |||||| ||
Sbjct 57886 CTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACAATTAAGTCT 57827
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290
||||| || |||||| | || ||| | |||| || ||| || || || |||
Sbjct 57826 TCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAAC 57767
Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338
|| || || ||||| || || | ||||| | ||| | || || | |||
Sbjct 57766 CTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGAGACGACACCAACTCGTTCTACGAC 57707
Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
| || | || | ||| | || | |||| | | | || ||| || | ||||
Sbjct 57706 TTCAAGAAGCTGCACGACATTGCCAAGGTCATTGTGC--GAAACCTCAACGCTATCATCG 57649
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| || || || || | || || ||| || ||||| ||||| || || || ||||
Sbjct 57648 ACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAGTCTAACATGCGACACCGACCCATTG 57589
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC-AAGA-TGGCATTTGATTC 364514
||| ||||| ||||| || || ||| || ||| |||| | || | ||||||| ||
Sbjct 57588 CTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATG--GCTCTACGACTCCCATTTGAGTC 57531
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || || || | ||||||| || || || || | || |
Sbjct 57530 CGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCTGTCGA 57471
Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634
|| || | || |||| | || ||| || | |||| ||||||
Sbjct 57470 AGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGCTCCCCTGC 57411
Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694
|| |||| | ||||||| ||||| ||||| || || || || | | ||| | ||
Sbjct 57410 CTCCAAGGGTGACCTCCAGTTCGATCTCTGGAACGTGACTCCTTCCGAGCTGTGGGAGTG 57351
Query 364695 GGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCC 364754
||| || |||| | | |||| ||||| || ||||| || | || ||
Sbjct 57350 GGACGATCTCAAGGCCAAGATCATGAAGACTGGTATGCGAAACTCGCTGTTGGTCGCTCC 57291
Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814
||||||||| || || ||| | ||||| || || ||| ||||||||||| || | ||
Sbjct 57290 CATGCCCACTGCCTCCACTTCCCAGATTCTTGGTTTCAATGAGTGCTTCGAGCCCTACAC 57231
Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874
||| |||| || || || |||||| | || ||||| | | | || || | ||
Sbjct 57230 TTCCAACATTTACTCTCGACGAGTTCTTGCTGGTGAATTCCAGATTGTCAACCCCTGGCT 57171
Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934
||||||| || || || |||||| || | |||||||||| || | ||
Sbjct 57170 GCTCAAGGACCTGGTTGAGGTTGGCCTGTGGAACGAGACCATGAAGAACCGAATTGTTGC 57111
Query 364935 CGCTAATGGTTCTGTGCAGAACAT-TCCAGGATT-TCCAGAAGATCTGAAGCCTATTTAC 364992
| || || || ||||||||||| ||| ||| |||| | ||| ||| | |||
Sbjct 57110 TGACAACGGATCCGTGCAGAACATCCCCAACATTCCCCAGGAAATC--AAGGACCTGTAC 57053
Query 364993 AAAACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCG 365045
|| ||||| ||||| ||||| | ||||| ||||||| ||||| | ||||||
Sbjct 57052 AAGACCGTGTGGGAGATTTCTCAGAAGCGAA---TCATTGAGATGGCCGCTGACCGATCC 56996
Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105
| | | || | | ||| ||||| | ||| | ||| | | || ||| |
Sbjct 56995 CCCTTCATTGACCAGTC----TCAGTCCCTCAACATTCACATCAAGGACCCTACCATGGG 56940
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157
|||||| || |||||||| |||||||| ||||| ||||| |||||||||
Sbjct 56939 CAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGT 56888
>seq13
Length=841849
Score = 138 bits (152), Expect = 3e-27
Identities = 369/557 (66%), Gaps = 18/557 (3%)
Strand=Plus/Plus
Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831
||||| ||||| | ||||| |||| ||||| ||||||| ||||| || ||| ||
Sbjct 421905 GTTCCTATGCTCAGAGTGTTCAACAACACTGCTCGGTACGTGGACCAAGGAGGAAACAAA 421964
Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891
|| ||| |||||||| ||||| | ||||| ||||| || ||||| || || ||
Sbjct 421965 CGTCCAGGAGCGTTTGCAGTGTATTTGGAGCCCTGGCATGCAGACATTTTGGATTTCCTG 422024
Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951
| || || |||||| || |||||| || || ||||| || ||||| || |
Sbjct 422025 AATCTGCGCAAAAACCATGGTGCCGAGGAAAATCGAGCCCGTGACCTCTTCTACGCCTTA 422084
Query 363952 TGGGTTTCTGACCATTTTATGAAGCGC---GTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008
||||| |||||| |||||| ||| || ||| || | || ||||| || ||
Sbjct 422085 TGGGTGCCTGACCTGTTTATG---CGCAAAGTCGAGAATGGCGAAAAGTGGTCTCTTTTC 422141
Query 364009 TGCCCACACGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-T 364066
|| || || || | || |||||| ||||||| ||||| || || | | | | | |
Sbjct 422142 TGTCC-CAGAAAGGCCCCAGGTCTGGCCGATGTTTGGGGAGAGGAATTCGAC-CGCAAGT 422199
Query 364067 ACGAAAAGTATGAATCGGAGGGA----AAGGCTCGTAAGACAATTCCCGCACAGAAGCTA 364122
|||| | || || || ||||| | |||| | ||| ||| ||| ||||
Sbjct 422200 ACGAGGATTACGAGTCTAAGGGACTTTACAACTCGCAG----ATTGACGCCCAGGAGCTG 422255
Query 364123 TGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGAT 364182
| ||||| || |||||||| |||||| ||| | ||| |||| |||||
Sbjct 422256 TTCAAGGCCATTCTGACGAGCCAGATTGAAACAGGAGGACCTTTCATGCTGTATAAAGAC 422315
Query 364183 TCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGT 364242
|| ||| || ||||||||| || |||| || ||||| | | ||| | |||
Sbjct 422316 AGCTGTAACGCGAAATCCAACCAGAAGAACCTCGGCACAATCAAATCGTCCAATTTGTGT 422375
Query 364243 ACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATC 364302
||||||||| | | ||| | |||| |||||| ||| || || || || || || ||
Sbjct 422376 ACCGAGATTGTCCAGTACTCGTCTCCTGACGAGGTTGCTGTTTGCAATCTGGCCTCTGTC 422435
Query 364303 GCGCTTCCGGCGTTTGT 364319
|| ||||| | ||||||
Sbjct 422436 GCCCTTCCTGAGTTTGT 422452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353115722678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |