Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq23 143 3e-29
seq14 122 8e-23
>seq23
Length=2267247
Score = 143 bits (158), Expect = 3e-29
Identities = 342/503 (68%), Gaps = 28/503 (6%)
Strand=Plus/Plus
Query 46098 CAAGAAAA---CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG-CGACTTTCGCCG 46153
|||||||| |||||||||| | ||||||||| | | | | | | || || | |
Sbjct 1857312 CAAGAAAAAGGCCGACTGGGCCCTCAAGTGGATCTCCGAC-GAAGAGTCCACCTTTGGAG 1857370
Query 46154 AGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCA 46213
|||| | | |||||||| || |||||| |||| || || ||| ||| ||| |||
Sbjct 1857371 AGCGACTCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCA 1857430
Query 46214 TCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATA 46272
|||| | |||| || | ||| | ||||||| ||||| || || ||||||||| ||
Sbjct 1857431 TCTTCTGGCTCAAGAAGCGAGGTC-TCATGCCTGGCCTCACCTTCTCCAACGAGCTCATC 1857489
Query 46273 TCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCAC 46332
|| || |||||||| ||||| || |||||||| || || || | ||||| |
Sbjct 1857490 TCCCGAGACGAGGGTCTGCACACTGACTTTGCCTGCCTG--CTTTT---CTCGCAC-CTT 1857543
Query 46333 GACAAGCTTGCGCCCGACACCG-----TGCTGAGCATGTTCAAG--GAGGCGGTGGCCAT 46385
|| || | | || || | || |||| | || | ||||| || | |||
Sbjct 1857544 GAGAACC----GACCCTCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCAT 1857599
Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC 46445
||| ||||||| |||| | ||| |||||| || ||||| || |||||||| ||
Sbjct 1857600 CGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTGGTCTGCTTGGTATGAACGCCAAGCT 1857659
Query 46446 AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC-CG 46503
|||||| | |||||||||||||| || ||||| ||||| || ||| || | | |
Sbjct 1857660 GATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTGCTAGT--TGCTCTCGGTAACTCC 1857717
Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563
||| | | || | ||| || || || || ||| | |||||||| |||| |||||
Sbjct 1857718 AAGGTGTATAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAG 1857777
Query 46564 ACTAATTTTTTCGAAAAGCGCGT 46586
|| || |||||||| ||||| ||
Sbjct 1857778 ACCAACTTTTTCGAGAAGCGAGT 1857800
>seq14
Length=2997610
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | ||| | || |||||||| || |||||||| ||
Sbjct 1826613 CCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1826672
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 1826673 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1826732
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 1826733 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1826792
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || |||||||| || || || || |||||||||||
Sbjct 1826793 TCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1826839
Score = 102 bits (112), Expect = 8e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||| || | ||| | || |||||||| || |||||||| ||| | || || |
Sbjct 1945188 CGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG 1945247
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| |||||||| || ||| |||| | |||||||||||||| |||||||| || |||
Sbjct 1945248 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTG 1945307
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | || || | |||||| | |||| ||| |
Sbjct 1945308 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATA 1945367
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233
|| || || || || || || || || || ||||
Sbjct 1945368 GTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1945401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012628895360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |