Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq23 159 4e-34
seq29 158 2e-33
seq13 105 8e-18
>seq23
Length=2267247
Score = 159 bits (176), Expect = 4e-34
Identities = 383/574 (67%), Gaps = 8/574 (1%)
Strand=Plus/Minus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| ||||||||||||| || | |||||||| || ||||| || ||||| || ||
Sbjct 1857510 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACC 1857451
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
||||| || ||||| || ||||| || || || || || ||||| || || || || ||
Sbjct 1857450 TCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGC 1857391
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCT--GTCATGTATCCACTTTTGAGC 32851
||||||||||| |||| ||||||| | || | || ||| |||||||| | ||
Sbjct 1857390 GGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGC 1857331
Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911
||| |||||||| || || | || || || ||||| || || || || || ||| ||
Sbjct 1857330 CCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG 1857271
Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971
|| || || || | ||||| || |||| || || | || || || |||||
Sbjct 1857270 CTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTT 1857211
Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031
|| || || || || ||||||||||| | ||||||| ||| || || |
Sbjct 1857210 CTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGA 1857151
Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091
||||| || | | || || || || || ||||| ||| ||||| || || | ||
Sbjct 1857150 GAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAAC 1857091
Query 33092 ATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT---TTATTCCAATCATTGATATCTT 33147
|| || || | || || | |||| ||| || | ||| ||| || || |
Sbjct 1857090 GTGGGAGATGAAGAACCGCTCATC-GTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT 1857032
Query 33148 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 33207
| | ||| | || || ||||||| || || ||||| ||||| || ||||| | ||
Sbjct 1857031 TTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC 1856972
Query 33208 AGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|||| || || || || || || || | |||||
Sbjct 1856971 AGATTTCGTGGTACTGGATGGGGAAGAGCACAAA 1856938
>seq29
Length=2752704
Score = 158 bits (174), Expect = 2e-33
Identities = 456/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Plus
Query 62996 AACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCAC 63055
||||| || || | || | ||| || || || || || | || ||||||| | |||
Sbjct 58002 AACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCAT 58061
Query 63056 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63115
|| ||| | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 58062 TCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGG 58121
Query 63116 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63175
|||| || || | || || ||||| |||||| || ||| |||| | | |||
Sbjct 58122 TCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATA 58181
Query 63176 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63235
|| ||||| || || | ||| || || | | ||||| || ||||| |||||||||
Sbjct 58182 TCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGA 58241
Query 63236 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 63295
|| | ||||| |||||||| ||||| || | || ||| || | ||||| ||||| ||
Sbjct 58242 TCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTT 58301
Query 63296 CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63355
|| || || || | || ||| ||| | || || || || || || ||||| ||
Sbjct 58302 CCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATA 58361
Query 63356 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 63415
|| || || || || || | || || ||| | ||||| |||||||| || ||
Sbjct 58362 CCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATG 58421
Query 63416 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63475
|| ||| ||||||| | || ||||| ||||| || | | |||||| ||
Sbjct 58422 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCG 58481
Query 63476 TTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTC 63534
|| | | || || ||||||||||| || | || | ||| | ||| ||||| |||||
Sbjct 58482 TTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAG-TTGTAGGTCTC 58540
Query 63535 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63594
||| || | | || | || || || || | ||| ||||| | ||| || ||
Sbjct 58541 AATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTG 58600
Query 63595 AGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63654
|||| || | | ||| | | || || ||| | | |||| || || ||
Sbjct 58601 GGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGGGTCTTGAA 58660
Query 63655 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693
||||| |||||||| | |||||||| ||||| | |||
Sbjct 58661 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAAT 58699
>seq13
Length=841849
Score = 105 bits (116), Expect = 8e-18
Identities = 462/713 (65%), Gaps = 30/713 (4%)
Strand=Plus/Minus
Query 62990 CGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA-CATTCATCCGGACACATCAA 63048
|| ||||| || ||||||||||||| | |||| || || | || | ||||| | |
Sbjct 422194 CGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCCTTTCTG-GGACAGAAAAG 422136
Query 63049 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63108
||||||| | || ||| || ||| |||||| || ||||| | ||| | ||
Sbjct 422135 AGACCACTTTTCGCCATTCTCGACTTTGCGCATAAACAGGTCAGGCACCCATAAGGCGTA 422076
Query 63109 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAA 63165
|| || || | || || || ||||||| || || ||||| |||| |||||
Sbjct 422075 GAAGAGGTCACGGGCTCGATTTTCCTCGGCACC---ATGGTTTTTGCGCAGATTCAGGAA 422019
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
||| ||| || | |||||| || ||||| || | || | |||| || ||||||||
Sbjct 422018 ATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAACGCTCCTGGACGTTTGTT 421959
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|||||| || || | ||| | ||| ||||| || | ||||| | ||| |||| || ||
Sbjct 421958 TCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTGAGCATAGGAACGATTCC 421899
Query 63286 ATTGGATGTACCATTGGTCCCTGAGAT-ATAGCTTCCACTGGCACGAATATTACTAAT-T 63343
|||| | || | | ||| | || | ||| ||| |||| | ||| || || |
Sbjct 421898 GGAGGATCTTCCTTGAGACCCAGTAATGAGAGC-TCCCTTGGCTCTAATGTTGTGGATAT 421840
Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCATA 63402
| || || || || || || |||| |||||| || || |||||| | ||| || ||
Sbjct 421839 GCAAG-CCGATACCTCCGGCGGTTTTGGAGATTTGGGCACA-CGTTTTGAGCGTGTCGTA 421782
Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462
|||||| || || || | |||| | || |||||| || | |||| |
Sbjct 421781 GATGCCGTCGATGGAGTCTGCTGCCATGGCCACCAGGAAACAGGACGAAAGTTGGCCCTG 421722
Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG-TA 63521
||||| ||||| || || |||||||| || || || || ||||| || | |
Sbjct 421721 GGGGGTTCCTGCATTGAACAAAGTAGGAGACGCATGTGTGAA----TTTTCTGAGCGACA 421666
Query 63522 GA---TTGTACGTCTCAATAGC--TGAGTCTAT-ATC-CCATTGATGAATTCCTACTGCG 63574
|| | ||| || || | ||| ||| ||| |||| |||| || | ||
Sbjct 421665 GAGCCTGGTAGGTTTCGCGCACCTTGAAAATATCATCTCCATGGATG----CCCAGGGCC 421610
Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634
|| ||||| ||||| || ||||||| || || | || | | | |||| |||||
Sbjct 421609 ACTCGCATCAACATATGTTGAGGTCGCTCCACCACGTTTCCGCCAACTCTCAATAAGTAT 421550
Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687
|| || |||| || || || ||||| ||| ||| | | |||||| | |||
Sbjct 421549 GACTTCTCCAGGGTCTTGAATCCAAAGTAGGAGTAAGTCATGTCTCGGTAGTA 421497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631770308400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |