Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq14 118 9e-22
>seq14
Length=2997610
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || | |||||||| || |||| || || ||||| | ||
Sbjct 1826839 ATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 1826780
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||||||||| ||||| || || ||
Sbjct 1826779 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 1826720
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || ||||| || ||| | ||||| ||| ||| | || || ||||||
Sbjct 1826719 CAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAAC 1826660
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | ||| | || ||||| | || || |||
Sbjct 1826659 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCTGCGACTTCGAGGTGGT 1826612
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| ||||| || || | || || || || |||| || || ||||| || | |
Sbjct 1945401 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACTATCACCCTCGAGGTGGAGTCCTCTG 1945342
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| ||| | ||| | |||| || || || ||||||||||| || || || || || |
Sbjct 1945341 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAGC 1945282
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
| || ||||| || ||||| || ||| | ||||| ||| || | ||||| |||||||
Sbjct 1945281 AGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTTCCGACTACAACA 1945222
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || || || ||||| | ||| | ||| ||||| | || ||||||
Sbjct 1945221 TCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGAGGT 1945175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727851652385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |