Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq14 118 9e-22 >seq14 Length=2997610 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | |||||||| || |||| || || ||||| | || Sbjct 1826839 ATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 1826780 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 1826779 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 1826720 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || ||||| || ||| | ||||| ||| ||| | || || |||||| Sbjct 1826719 CAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAAC 1826660 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | ||| | || ||||| | || || ||| Sbjct 1826659 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCTGCGACTTCGAGGTGGT 1826612 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 ||||||| ||||| || || | || || || || |||| || || ||||| || | | Sbjct 1945401 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACTATCACCCTCGAGGTGGAGTCCTCTG 1945342 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | ||| | ||| | |||| || || || ||||||||||| || || || || || | Sbjct 1945341 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAGC 1945282 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | || ||||| || ||||| || ||| | ||||| ||| || | ||||| ||||||| Sbjct 1945281 AGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTTCCGACTACAACA 1945222 Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | || || || ||||| | ||| | ||| ||||| | || |||||| Sbjct 1945221 TCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGAGGT 1945175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727851652385