Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq23 174 3e-38
seq9 165 2e-35
seq29 132 1e-25
seq19 87.8 4e-12
>seq23
Length=2267247
Score = 174 bits (192), Expect = 3e-38
Identities = 565/861 (66%), Gaps = 26/861 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||| || || | |||||| |||||||||| ||||||||||||||||||||| |||
Sbjct 1857791 TCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1857732
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| || ||| ||||| | || || || || | | ||||| || |||||||| |
Sbjct 1857731 GAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAGACGGTCAGCGACAAACTCGATG 1857672
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | | |||||| |||| || || ||| || | || ||| | |
Sbjct 1857671 TACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAGCGTCAGTAAGG 1857612
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAAT--TGCCTTCACCTGT-GCCAGAGAC 251799
|| |||| ||| || |||| | |||| ||||| | | ||| | | | ||
Sbjct 1857611 AACTCCTGCTCGATGCCAACAG---CCTCGACAATGACGTCCTCAACAATCTTCTTTGAG 1857555
Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859
| |||||| || | ||| | || || | |||| | |||||||||||||||
Sbjct 1857554 GGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGACCCTCGTCT 1857495
Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919
|| ||||| ||||||||| | ||||||||||| | || || ||| ||||||||
Sbjct 1857494 CGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAG 1857435
Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGG 251979
||||| | | || || || ||||| | | |||||||| | | |||| ||
Sbjct 1857434 AAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCAATGAGT 1857375
Query 251980 CGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTT 252036
||||| |||| |||| || | || | |||| | ||||| | ||||| |||
Sbjct 1857374 CGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTCGGCCTT-TTT 1857316
Query 252037 CCAACCGC-GGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTC 252095
| || |||||| || ||||| || | || || || | ||||| |||||
Sbjct 1857315 CTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCTTTGGGGTCCTT 1857256
Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTG 252155
|||| | || | ||| || ||||| |||| || |||||| || | | |||||
Sbjct 1857255 GATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTG 1857196
Query 252156 GTAAGCATAGAA----TAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTG 252211
| | | ||||| | | | | ||| ||| | | || || ||| || |
Sbjct 1857195 GAAGCCGTAGAAGCACTTGGC-CTCGG--GGGCCTG-CACCTCGCCGGAGAATCGCTCAA 1857140
Query 252212 CAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGA 252271
| | |||||| | || || || ||| | | |||||||| | |||| | |||||
Sbjct 1857139 CCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGA 1857080
Query 252272 AGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTC--AGAGG 252329
|| |||||||||| |||||| ||| |||||| | ||||||| ||| |||
Sbjct 1857079 AGAACCGCTCATCGTTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCT--TTCCAAGATC 1857022
Query 252330 AACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACATCAG 252388
|| || || | |||||||| | || | | |||||||||||||| ||| | | ||
Sbjct 1857021 AATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGC-CAGATTTCGT 1856963
Query 252389 GGTACTTGATTGGGAA-AGCA 252408
|||||| ||| ||||| ||||
Sbjct 1856962 GGTACTGGATGGGGAAGAGCA 1856942
>seq9
Length=1942798
Score = 165 bits (182), Expect = 2e-35
Identities = 418/624 (67%), Gaps = 29/624 (5%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||||||| ||||||| ||||| || || || |||| ||||||||||| |||
Sbjct 1640304 GGCGAGGATCTGTGTAACTGTGAGTTCTCTCTGGCTTACGGTGCTAAGATTCTGCTGAAC 1640363
Query 279405 TCTACCCGCCT-CAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
|||| || | || ||||||| ||| || || |||||| ||||| || || ||
Sbjct 1640364 CGAACCCAGCTGCGAC-TCAAGCGAGGCCGACGATACGGTCTCTGTGGTCCTAACGGTGC 1640422
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|||||| ||| || ||||| |||||||| ||||||||| | || || ||||| || |
Sbjct 1640423 TGGTAAGTCCACCCTGATGCGAGCCATTGCCAACGGTCAGGTCGAGGG-TTTCCCCACCC 1640481
Query 279524 ATCTGAGGTAAGGA-CAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCA 279582
| | || || | || | || || |||||||| ||| | | | | || | ||
Sbjct 1640482 AGGAGGAGTGTCGAACTGTCTTCGTCGACCACGACATTGACGGTACCCACGCCGACACCA 1640541
Query 279583 CTGTGTTCGACTTCCTAACGTCTGACAATCAG--GTTATGGAAATCAGCTCTCCTGAGGA 279640
|| |||||| ||||| || | | | | | | ||| | || |||||
Sbjct 1640542 ACGTTGTCGACT-----ACGTCCGAAAGACCGCCGGTGAGTCCATCGGTACTGAGGAGGA 1640596
Query 279641 AATCATCCAGAAACTGGAGGCCAATGGTTT---TGATGAAAGAATGCGTAATCTGCCAGT 279697
|| || | ||| | | || ||| || | | || | |||| |
Sbjct 1640597 GGTCCGAAAGCAGCTGCTTGACTTCCTGTTCACTGACGAGATGACCCGAA---TGCCCAT 1640653
Query 279698 AGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCT---CACTCGCGCCATTCTACT 279754
|||||||| ||||| ||||||||||||||||| || |||| || | | | |
Sbjct 1640654 CACCTCTCTGTCTGGTGGATGGAAGATGAAGCTGGCTCTTGCCACTGCCGTCCTCCGAAA 1640713
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814
| |||||| |||| |||||||||||||| |||||||| |||| ||| |||||| ||
Sbjct 1640714 G---GCCGATATCCTGCTGCTTGATGAGCCTACCAACCATCTGGATACCGTCAACGTTGC 1640770
Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGA 279874
||||| || |||||| | || ||| | | | | ||| |||| ||||| |||||
Sbjct 1640771 TTGGCTGGTCAACTACCTTAACA-CCTGTGG--TATCACCTCCATCATCGTCTCCCACGA 1640827
Query 279875 CTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCT 279934
|||||| ||||| ||| ||| || |||||||||||| |||| | | |||||
Sbjct 1640828 CTCTGGTTTCCTCGATAACGTCTGTGAGTACATCATTCACTACGAGCGA---TTCAAGCT 1640884
Query 279935 CTCCAAGCACATCGGCAACCTGTC 279958
| ||| ||| || ||||||||
Sbjct 1640885 CCGAAAGTACAAGGGTAACCTGTC 1640908
Score = 95.1 bits (104), Expect = 2e-14
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 280677 CTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAG 280736
|| ||||| || |||||| || |||||||||| || || ||||| ||||| || |||
Sbjct 1641675 CTTGGTCTCGAGCCCGAGCTTGTCTCTCACTCTCGAATCCGAGGTCTGTCTGGTGGTCAG 1641734
Query 280737 AAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796
|||||||| ||||| | | || | ||||| | || || | ||||| || ||
Sbjct 1641735 AAGGTCAAGCTTGTGCTTGCCGCCTGTACCTGGCAGCGACCCCATCTTATCGTCCTTGAT 1641794
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|||||||||||||||||||| || || || || ||||||
Sbjct 1641795 GAGCCTACCAACTATCTGGATCGAGACTCTCTTGGAGCTCTG 1641836
>seq29
Length=2752704
Score = 132 bits (146), Expect = 1e-25
Identities = 495/764 (65%), Gaps = 23/764 (3%)
Strand=Plus/Plus
Query 293020 TAATACACAAGTGTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCATAGAC 293079
|| |||| | ||| || |||||||||||||| ||||||| |||| || || | |
Sbjct 56880 TAGTACATACCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAG---C 56936
Query 293080 TTCAGTGTGGGAGTGGCCAGGAA---AAGGTTCATGCTCTGCGTCTGATCGACAAAGGCA 293136
|| ||| || | || || || ||| | | ||| | ||| || | ||||
Sbjct 56937 TTGCCCATGGTAGGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGG 56996
Query 293137 CCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTAC 293196
|| ||||| || | ||||| | | |||| ||| ||||||||| |||||||||
Sbjct 56997 GATCGGTCAGCGGCCATCTCAATGATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTAC 57056
Query 293197 ACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTG---GCA 293253
| |||||| || | ||||| | ||||| | || ||||||| |||
Sbjct 57057 AGGTCCTTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGA---TCCGTTGTCAGCA 57113
Query 293254 ATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAG 293312
| ||| |||||||||| |||||| ||| || || || ||| || || || ||
Sbjct 57114 ACAATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCT-CAACCAGGTCCTTGAGCAG 57172
Query 293313 GTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGT 293372
| | |||||||| |||| |||||||| ||| || || ||||||||| |||||
Sbjct 57173 CCAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGT 57232
Query 293373 GATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAG 293432
| ||| ||| |||| | || |||||| | ||| || || || ||||| |
Sbjct 57233 GTAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGG 57292
Query 293433 AGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGACACGCGATTCGAGACCCGCCCA 293489
||| | ||| ||||| | || ||| |||| ||| | | |||| | ||||
Sbjct 57293 AGCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCA 57352
Query 293490 GTCC-AGAGCAGTCTGA-GGTGTAACACCCCAGAGATGATACTGCATGATACCCTTGCTG 293547
||| | ||| || || || || || |||||||| |||| | | ||||||| |
Sbjct 57353 CTCCCACAGC--TCGGAAGGAGTCACGTTCCAGAGATCGAACTGGAGGTCACCCTTGGAG 57410
Query 293548 GCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGCC 293607
||||| || |||| ||||| | || || | |||| || | |||| |||| ||
Sbjct 57411 GCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCT 57470
Query 293608 TCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCA 293667
|| ||||| | ||| ||| ||||||||||| ||||||||| |||| |||
Sbjct 57471 TCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCG 57530
Query 293668 GAGTCAAACGGCA-TCTTCAGCTGGAAGAACACATCCTGCAGACCCTGTACACCTACACC 293726
|| ||||| || | || | || | ||| || ||||||||| ||||| | | |
Sbjct 57531 GACTCAAATGGGAGTCGT-AGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAGAGC 57589
Query 293727 AACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAACCG 293770
|| ||| || | ||| |||| | ||| |||||||| ||||
Sbjct 57590 AATGGGTCGGTGTCGCATGTTAGACTTCTTGGCCTCGGGGACCG 57633
>seq19
Length=1292317
Score = 87.8 bits (96), Expect = 4e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896
||||| ||||| || || ||||||||||| || || |||| | |||||| || |
Sbjct 507002 TGCACGCTCATTCTCACTGAGGGAGACTCCGCCATGACCATGGCGAACGCTGGACTGTCT 506943
Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956
||| | ||||| ||| | ||||| ||| || || ||||||||| |||||||||||||
Sbjct 506942 GTGATTGGTCGAGAACGATATGGCGCCTTTCCTCTGCGTGGTAAGATGCTCAACGTGCGA 506883
Query 217957 GATGCCTC 217964
|| || ||
Sbjct 506882 GAGGCGTC 506875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836418094389
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