Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq23 152 6e-32 >seq23 Length=2267247 Score = 152 bits (168), Expect = 6e-32 Identities = 348/518 (67%), Gaps = 12/518 (2%) Strand=Plus/Minus Query 125768 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 125827 || ||||||||||| ||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 1857800 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 1857741 Query 125828 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 125885 ||||| | ||||| | | ||| | ||| | | | || ||||| || | || Sbjct 1857740 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 1857683 Query 125886 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCG 125945 | |||| ||||||| ||||| || | ||||||||| | || ||| || || | Sbjct 1857682 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 1857623 Query 125946 CGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTGT 126005 |||| | |||| ||| ||| || | || || || | || | | | || | | Sbjct 1857622 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 1857563 Query 126006 CCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGA 126064 | |||| || | ||| || | ||| || |||||| || ||| ||| Sbjct 1857562 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGA 1857504 Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||||||||||| || || |||||| || || ||||||||||| |||||| Sbjct 1857503 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTC 1857444 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || ||||||||||| ||||| || || || Sbjct 1857443 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAG 1857384 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATCGCCCAC 126241 |||| ||| ||||| |||||| | |||| | ||| | |||||| | ||||| Sbjct 1857383 GCAATGAGTCGCTCTCCAAAGGTG---GACTCTTCGTCGGAGATCCACTTGAGGGCCCAG 1857327 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | |||||||||| ||| || |||| ||||| ||| || Sbjct 1857326 TCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 1857289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353383459320