Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq23 143 3e-29
seq14 113 4e-20
>seq23
Length=2267247
Score = 143 bits (158), Expect = 3e-29
Identities = 331/493 (67%), Gaps = 13/493 (3%)
Strand=Plus/Plus
Query 52341 AAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGC 52400
|||||||| | ||||| | ||||||||| ||| |||| | | |||||
Sbjct 1857316 AAAAAGGCCGACTGGGCCCTCAAGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGA 1857375
Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460
| | ||||| ||| ||||||||| | || || |||||| || ||| |||||||
Sbjct 1857376 CTCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTC 1857435
Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520
| | || | | ||| | ||||| ||||| || ||| ||||||| | || || ||
Sbjct 1857436 TGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGA 1857495
Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGA-CCGAA-- 52577
||||| || |||||||| |||||||| ||||| | | | | | || ||||
Sbjct 1857496 GACGAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCTCGCACCTTGAGAACCGACCC 1857555
Query 52578 --AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGG 52635
||| |||| | | || | | ||| || ||||| || | ||||| |||
Sbjct 1857556 TCAAAGAAGATT-GTTGAGGA-CGT---CATTGTC---GAGGCTGTTGGCATCGAGCAGG 1857607
Query 52636 AGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG 52695
|||| |||| | ||| ||||| | ||||| || |||||||| || ||||||
Sbjct 1857608 AGTTCCTTACTGACGCTCTGCCCTGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCC 1857667
Query 52696 AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCA 52755
|||||||||||||||| || || |||||| | || ||||| | | ||| | |
Sbjct 1857668 AGTACATCGAGTTTGTCGCTGACCGTCTGCTAGTTGCTCTCGGTAACTCCAAGGTGTATA 1857727
Query 52756 ACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTT 52815
|| | ||| || || || || ||| | ||||| || || | ||||||||||||||||
Sbjct 1857728 ACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTT 1857787
Query 52816 TCGAGAAGCGAGT 52828
|||||||||||||
Sbjct 1857788 TCGAGAAGCGAGT 1857800
>seq14
Length=2997610
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | |||| || | ||| | | |||||||| || |||||||||||
Sbjct 1826613 CCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1826672
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || ||||||| |||| || ||||| |||||||| ||
Sbjct 1826673 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1826732
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| |||||||||
Sbjct 1826733 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1826792
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || ||||| || || || || ||||||||||||||
Sbjct 1826793 TCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1826839
Score = 113 bits (124), Expect = 4e-20
Identities = 166/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | |||| ||| | ||| | | |||||||| || ||||||||||||
Sbjct 1945176 CCTCCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1945235
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||||||| || ||||||| |||| || ||||| |||||||| ||
Sbjct 1945236 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 1945295
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||| | |||||||||
Sbjct 1945296 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 1945355
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTA 138620
|||| || | || || ||||| || || || ||||| || |||| ||| |||
Sbjct 1945356 TCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTGGGTTA 1945409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262220104880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |