Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq23 150 2e-31 >seq23 Length=2267247 Score = 150 bits (166), Expect = 2e-31 Identities = 351/519 (68%), Gaps = 14/519 (3%) Strand=Plus/Minus Query 127241 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAAT 127300 || ||||||||||| ||||| ||||| || | || ||| |||||||| || || || Sbjct 1857800 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 1857741 Query 127301 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 127358 ||||| | ||||| | | ||| | ||| | | | || ||||| || | || Sbjct 1857740 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 1857683 Query 127359 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCG 127418 | |||| ||||||| ||||| || | ||||||||| | || ||| || || | Sbjct 1857682 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 1857623 Query 127419 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGT 127478 |||| | |||| ||| ||| ||| | ||||| || | || | | | || | | | Sbjct 1857622 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 1857563 Query 127479 CCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG-CAAACTCTTGGTGG 127534 | |||| || | || || | ||| || || ||| |||| || ||| Sbjct 1857562 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAG---CAGGCAGGCAAAGTCAGTGTGC 1857507 Query 127535 AGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGC 127594 ||||||||||| ||||||||||| || || |||||| || || ||||||||||| ||| Sbjct 1857506 AGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGC 1857447 Query 127595 TTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCG 127654 ||||| | |||||| || | || ||||| ||||||||||| ||||| || || Sbjct 1857446 TTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCA 1857387 Query 127655 AACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCA 127713 || |||| || ||||| |||||| | | ||| || | | |||||| | ||||| Sbjct 1857386 AAGGCAATGAGTCGCTCTCCAAAGGTG-GACTCTTCGTCGGAGATCCACTTGAGGGCCCA 1857328 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | |||||||||| ||| || |||| ||||| ||| || Sbjct 1857327 GTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 1857289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506977603640