Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq14 170 4e-37
seq20 111 3e-19
>seq14
Length=2997610
Score = 170 bits (188), Expect = 4e-37
Identities = 181/238 (76%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| || ||| || || ||||||||||| || || || ||||| |||| ||||||
Sbjct 1945181 TCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 1945240
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || |||||||||||||| |||||||||||||| || ||||| || || || ||
Sbjct 1945241 TCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCC 1945300
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| ||||||||||| || ||||| || ||
Sbjct 1945301 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAG 1945360
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTG 195156
||| | ||||| || || | || || || || | ||||| | ||||| ||||||
Sbjct 1945361 GGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACT--GGGTTAGTTGGTG 1945416
Score = 154 bits (170), Expect = 3e-32
Identities = 166/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| || || || || ||||||||||| || || || ||||| || | ||| ||||
Sbjct 1826622 AGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 1826681
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || |||||||||||||| |||||||||||||| || ||||| || ||||| || ||
Sbjct 1826682 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 1826741
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || ||||||||| || |||||||| ||| ||||| || |||||
Sbjct 1826742 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 1826801
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| ||||| || || | || || || || | |||||||
Sbjct 1826802 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1826841
>seq20
Length=352371
Score = 111 bits (122), Expect = 3e-19
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 194973 AAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGG 195032
|||||||| ||||| |||||||||||||| ||||| || ||||| || ||||| |||||
Sbjct 352369 AAGAGTTCGACCATCCTCGAGCTGCTTACCAGCGAAAATCAGTCGCTGCTGGTCCGGAGG 352310
Query 195033 AATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
||| || || ||||| ||||| || ||||||||| || |||||||| ||
Sbjct 352309 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGA 352259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481187758243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |