Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq14 158 1e-32
seq9 114 1e-19
>seq14
Length=2997610
Score = 158 bits (174), Expect = 1e-32
Identities = 561/866 (65%), Gaps = 18/866 (2%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 27208 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 27267
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 27268 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 27325
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 27326 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 27383
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| |||||||| |||| || ||| | ||||| ||| ||||||| |
Sbjct 27384 ACGACTGCGAACCGCTTGCGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAAACATC 27443
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 27444 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 27503
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || | || ||||| || | || |
Sbjct 27504 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTCGAGCCAGTTGAGAAGGTCCT 27563
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 27564 GAAGGACGCTAAGATGGACAAGGCCTCGGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 27623
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || || | | ||
Sbjct 27624 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAGGAGCTGAA 27680
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 27681 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 27740
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | |||||| |||| || |
Sbjct 27741 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTCGATGTTGCTCCGCTGT 27799
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
|||| || | || || | ||| ||| ||||||| || || ||| |||| ||||||
Sbjct 27800 CTCTGGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCTACTA 27859
Query 552379 TTCCTTGTAAAAAATCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437
| || || || || || | || || || || | || || || ||| |||
Sbjct 27860 TCCCCACCAAGAAGTC-CGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTG 27918
Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497
||||| | ||||| || || || || || || || || ||||||| |||
Sbjct 27919 ATTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATCCTTGGTAAGTTT 27978
Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557
| | ||||||||||| |||||||| || || || || || ||||| || ||||||
Sbjct 27979 GAGCTGTCCGGTATTCCTCCCGCTCCTCGAGGTGTTCCTCAGATCGAAGTCACCTTCGAT 28038
Query 552558 ATCGATGCCAATGGAATTTTGAATGT 552583
| || ||||| || ||| | || ||
Sbjct 28039 GTTGACGCCAACGGTATTCTCAACGT 28064
Score = 154 bits (170), Expect = 1e-31
Identities = 560/866 (65%), Gaps = 18/866 (2%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 32535 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 32594
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 32595 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 32652
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 32653 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 32710
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| |||||||| |||| || ||| | ||||| ||| ||||||| |
Sbjct 32711 ACGACTGCGAACCGCTTGCGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAAACATC 32770
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 32771 CATTGAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 32830
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || | || ||||| || | || |
Sbjct 32831 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTCGAGCCAGTTGAGAAGGTCCT 32890
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 32891 GAAGGACGCTAAGATGGACAAGGCCTCGGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 32950
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || || | | ||
Sbjct 32951 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAGGAGCTGAA 33007
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 33008 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 33067
Query 552260 TTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318
|||||| | || | | ||| || ||||| | || | |||||| |||| || |
Sbjct 33068 TTCTGGTGACACTTCCTCTTCCACT-CAGGATATTCTGCTCCTCGATGTTGCTCCGCTGT 33126
Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378
|||| || | || || | ||| ||| ||||||| || || ||| |||| | ||||
Sbjct 33127 CTCTGGGAATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCGACTA 33186
Query 552379 TTCCTTGTAAAAAATCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437
| || || || || || | || || || || | || || || ||| |||
Sbjct 33187 TCCCCACCAAGAAGTC-CGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTG 33245
Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497
||||| | ||||| || || || || || || || || ||||||| |||
Sbjct 33246 ATTCAGGTCTTTGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATCCTTGGTAAGTTT 33305
Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557
| | ||||||||||| |||||||| || || || || || ||||| || ||||||
Sbjct 33306 GAGCTGTCCGGTATTCCTCCCGCTCCTCGAGGTGTTCCTCAGATCGAAGTCACCTTCGAT 33365
Query 552558 ATCGATGCCAATGGAATTTTGAATGT 552583
| || ||||| || ||| | || ||
Sbjct 33366 GTTGACGCCAACGGTATTCTCAACGT 33391
>seq9
Length=1942798
Score = 114 bits (126), Expect = 1e-19
Identities = 356/546 (65%), Gaps = 14/546 (3%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| ||||||| || ||||| || || ||
Sbjct 16708 GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 16767
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
||||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 16768 GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 16825
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || |||| || | ||| |||||| ||
Sbjct 16826 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAC--ATCTCCACCAACCAGCGAGCTCTCCG 16883
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| | ||||| ||| |||| || |
Sbjct 16884 ACGGCTGCGAACCGCTTGTGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAGACATC 16943
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
|| || | || || | | |||||| ||||||| | || | || | | |||
Sbjct 16944 CATCGAGATCGACTCTCTCTATGAGGGTATTGATTTCTACACCTCCATCACTCGAGCCCG 17003
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || | || ||||| || | || |
Sbjct 17004 ATTCGAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTCGAGCCAGTTGAGAAGGTCCT 17063
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| ||| | ||||| || || || ||| | || ||||| ||||||||||| || ||
Sbjct 17064 GAAAGACGCTAAGATGGACAAGGCCTCAGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 17123
Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAA 552199
|||| || || | | | | | | |||| | ||||| || ||| | | ||
Sbjct 17124 TCGAATCCCCAAGGTGC---AGAAGCTCGTTTCTGACTTCTTCAACGGAAAAGAGCTGAA 17180
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259
| | | | || || ||||||||||||||||| ||||| || | || || || || ||
Sbjct 17181 TCGATCTATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCT 17240
Query 552260 TTCTGG 552265
||||||
Sbjct 17241 TTCTGG 17246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294466349210
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