Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq14 100 2e-16
>seq14
Length=2997610
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| || | ||| || ||| ||| || || || ||||| ||||| || ||||
Sbjct 1826622 AGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 1826681
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||||||||| || || |||||||| || |||| ||||| ||||||
Sbjct 1826682 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 1826741
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || || | ||||||||| | ||
Sbjct 1826742 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 1826801
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | || || ||||||||||||||
Sbjct 1826802 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1826839
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| || | ||| || ||| ||| || || || ||||| || || ||| ||||
Sbjct 1945185 AGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGG 1945244
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||||||||| || || |||||||| || |||| ||| | ||||||
Sbjct 1945245 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCC 1945304
Query 48669 TTGTC 48673
|||||
Sbjct 1945305 TTGTC 1945309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937465362367
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |