Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq23 264 2e-65
seq29 260 3e-64
>seq23
Length=2267247
Score = 264 bits (292), Expect = 2e-65
Identities = 574/858 (67%), Gaps = 20/858 (2%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| |||||||||||||||| | ||| |||||| || || |||||||||
Sbjct 1856965 GAAATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGAT 1857024
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593
|| | |||||||||| | |||| | | ||| |||| ||| || |||
Sbjct 1857025 CTTGGAAAGGACATGGGTGACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATC 1857084
Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650
| |||| | ||||||||||| ||||| || ||||| || |||||||| ||| |||
Sbjct 1857085 TCCCACGTTCTCGCATTCTTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAG 1857144
Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710
||||| || | || |||||| | ||||||||||| |||||||| ||||||||
Sbjct 1857145 CGATTCTCCGGCGAGGTGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATG 1857204
Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767
|| || || | ||||| ||| || | ||| ||||| || ||||| | |||
Sbjct 1857205 ATGGAGAACATCCACTCCGAGACCTACTC---GCTGCTGATCGACACATACATCAAGGAC 1857261
Query 25768 GTCGCCGAGAGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825
| | |||| || | ||||| ||||||||| ||| ||| ||||||||| |
Sbjct 1857262 --CCCAAAGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAA 1857319
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTG 25884
|||| |||||| | ||||||||| | | | || | | || ||||| ||||| ||
Sbjct 1857320 AGGCCGACTGGGCCCTCAAGTGGATCTCCGACGA-AGAGTCCACCTTTGGAGAGCGACTC 1857378
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||||||| || || ||||||||||| ||| ||| || || || |||||||||||
Sbjct 1857379 ATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGG 1857438
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || |||||| || || ||| ||||||||||||||| | | |||
Sbjct 1857439 CTCAAGAAGCGAGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 1857498
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
|||||||| |||| || |||||||||||||| | | || ||| | || |||
Sbjct 1857499 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTTTTCTCG---CACCTTGAGAACCGACCC 1857555
Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124
|| | ||| || | |||| |||||||| | |||||| ||||||| |
Sbjct 1857556 TCAAAGAAGATTGTTGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTT 1857615
Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184
| || |||||| || || ||| |||| |||||
Sbjct 1857616 ACTGACGCTCTGCCCTGTGGTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATC 1857675
Query 26185 GAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243
|||| ||| || |||| |||||| || | || || | ||| | || | | |
Sbjct 1857676 GAGTTTGTCGCTGACCGTCTGCTAGTTGC-TCTCGGTAACTCCAAGGTGTATAACTCCAC 1857734
Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303
||||| |||||||| ||||| ||||| || ||| || ||||||||||| || || ||
Sbjct 1857735 CAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAA 1857794
Query 26304 GAGGGTCGGCGACTATCA 26321
| | || |||||| ||
Sbjct 1857795 GCGAGTGTCCGACTACCA 1857812
>seq29
Length=2752704
Score = 260 bits (288), Expect = 3e-64
Identities = 936/1444 (65%), Gaps = 31/1444 (2%)
Strand=Plus/Plus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486
|||||||||||||||| |||||| ||||||| |||||||||| || || |
Sbjct 57481 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCAAATG 57540
Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546
| | || || | ||| ||||||||| ||||| || || | | | ||||| | ||
Sbjct 57541 GGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAGAGCAATGGGTCGGT 57600
Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
||| | |||| || || || || || || || |||| |||||| | | ||
Sbjct 57601 GTCGCATGTTAGACTTCTTGGCCTCGGGGACCGGGTAGTAGTTTCGGTCGATGATAGCGT 57660
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
||||||| | ||||| || | | ||| |||||||| | | | | | | | |
Sbjct 57661 TGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGAAGTCGTAGAACGAGT 57720
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
| | |||| | ||| ||||||| | || || | | |||||||| || |
Sbjct 57721 TGGTGTCGTC-TCGAGTA-----ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGA 57774
Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786
| || ||||| || | |||| || ||||| || ||||| |||| |
Sbjct 57775 CAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTAGAAGACTTAA 57834
Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846
| || || |||| || || || ||||| || ||| | ||||||||| ||||| ||||
Sbjct 57835 TTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGG 57894
Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCACC 221905
| ||| | ||| ||| | ||||| | || ||| || | ||||| | |
Sbjct 57895 GGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT-TCTGGGCAGGGATG 57953
Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965
|| | | || ||||| ||| | | | || || ||| | ||||| |||
Sbjct 57954 GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCG---TACAGCTGCTTAAACTCATCA 58010
Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025
|| || | ||||| || || || ||| | ||| |||||||| |||| | |||
Sbjct 58011 CCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTC 58070
Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085
| | ||| | || |||||| ||||| ||||||||||| ||| | || || |||| ||
Sbjct 58071 TGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCT 58130
Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145
|| ||| ||| |||| ||| || | ||| || | ||||| || || || |||||
Sbjct 58131 CGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGC 58190
Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC-AT 222204
|| ||||| || || | || | || || |||||||||||||| |||||||| || ||
Sbjct 58191 CAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTAT 58250
Query 222205 CCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | | | ||| ||| || || | || || | |||||||| ||||| |
Sbjct 58251 CGGG--CGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAG 58308
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGG 222323
| || |||||| | || || | | ||| | ||||| |||||||| ||||
Sbjct 58309 TTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGG 58368
Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383
| || || |||| || ||| | ||||| || || |||||| || || ||||| |
Sbjct 58369 CAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGT 58428
Query 222384 CCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACA 222443
|||| | ||| | || ||||| ||||||||||||| | || | | |||||| | |
Sbjct 58429 CCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGA 58488
Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTC 222503
| ||||| ||||| || ||||| | |||||| | ||| ||||| | | | |
Sbjct 58489 GAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCC 58548
Query 222504 TGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT 222563
||| |||||||| ||||| || | | | || |||| ||| | ||||| | ||
Sbjct 58549 GGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCT 58608
Query 222564 ---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
| |||| ||| ||| || | |||||||| | | ||||| |||||||| ||||
Sbjct 58609 CGGCAACAGCACCGTTG--ACTCG-CAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAA 58665
Query 222621 AGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGAC-TTG 222676
|||||||| |||| ||||||| | ||| | | |||| ||| ||||| || | |||
Sbjct 58666 AGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCGCCGTTGAGCTCGTCGGCGTTG 58724
Query 222677 TGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCG 222736
|| ||| | ||| | | || || || | ||| | || || ||| | |
Sbjct 58725 GCCTGCACGGT---GTCGTACAGCTCCTTGGAGACCATGGGCGAGTGCTTCTTGTTTCGG 58781
Query 222737 GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTT 222795
||||| |||| |||||||| | | | | | |||||| | || | ||||||||
Sbjct 58782 GGGTTCACGTAGTGGTACAAGTCGTAAACCACCTGCGAGAACTGCTTCTTG-GTCTGCTT 58840
Query 222796 GTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGT 222855
||||| || ||||| ||||| || | |||| || |||||||||| |||| |||||
Sbjct 58841 ATGCAGGTTGGACACAGCGATTCGGGCAGCCAGAATCGCATAGTCAGGATGCAGAGTGGT 58900
Query 222856 CATG 222859
||||
Sbjct 58901 CATG 58904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844463293760
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