Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq13 158 1e-33
seq29 118 1e-21
>seq13
Length=841849
Score = 158 bits (174), Expect = 1e-33
Identities = 499/764 (65%), Gaps = 16/764 (2%)
Strand=Plus/Minus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || |||||||||| || |||| ||| || || ||||||||||||||||| ||
Sbjct 423359 TTTGTCCACAGTAAACTGGATAGCATGAGCAGCAGGCGGAGTTCTCAGATAATACATGCC 423300
Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTA----ACGCGTAAG 138268
||||| | ||| | |||| | | | || || | |||| | | ||||||
Sbjct 423299 TGTTTTAAGTCCAGCCTTCCAGCCATGGAAATGCATGGCTGTGATTTTTCCATGCGTAA- 423241
Query 138269 TCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAG-CGCCTCGATCA 138327
|| | | || || ||||||| ||| || || || ||| | | |||| || ||
Sbjct 423240 TC---TCAGGCATGAAAATGTTAAGCGACTGGGATTGGTCAATGTAGGGCGCC-CGTGCA 423185
Query 138328 ATGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGA 138387
||||| | ||| | ||| || || |||||| | || |||| | | ||
Sbjct 423184 GCAGCCATATCAATGATATTACGGGCCTTGATTTCCCACGCAGTTCTGTACACGGCTCGG 423125
Query 138388 ATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447
|| ||| ||||| | || | || || |||||| | ||||||||| |||
Sbjct 423124 ATGTGTTCGGGTATCTGGGTGATGCTCTGGATCGAGCCGTTGTCGTGAATGATGCGGTTT 423065
Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507
|||| || ||| | ||| || ||||| | || || ||||| | ||| |
Sbjct 423064 TTCATCTCCTCGGTCCACATGCCCAGTTTGATTAGATCTTTCATCAGCCACTGGTTCACC 423005
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
|| |||| ||||| ||| || ||||||| |||||||||| ||| | || || ||
Sbjct 423004 ACGAGAAACTCACCAGCCTGGACCCGACGAAGGTAAATGTTGGACGTGTACGGTTCGAAA 422945
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
| ||||||| ||||||||||| | |||| || || |||||| || || | |||
Sbjct 422944 CACTCGTTGTGGCCCAGAATCTGCGATGTGGAAGCTGTAGGCATGGGGGCAACAAGTAGA 422885
Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGA-GCGACGACCAGTCCCACAAA 138684
|| || || | |||||| || | || || ||||| |||| | ||| ||||| | |
Sbjct 422884 GAGTTTCGCATACCGTGTTTGGCGAGCTTGGT--CTTGAGGCGA-GCCCAATCCCAGAGA 422828
Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744
|| ||| | |||||||||| ||| |||| | | ||||| ||| ||||||||||||
Sbjct 422827 TCCGACGGTGTCTTGTTCCACAGATCAAACTGCAGCTTTCCCTGACTGGCGGGACTGCCT 422768
Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804
|| || | || || || || || |||| |||| | ||||| || ||
Sbjct 422767 TCATAGGTCTCATAGGGTCCCAATTCAGCGGCCAGCTCGATAGATGCCTCACAGGCTGCA 422708
Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864
| |||||| ||||| || | ||| | | | ||||||| ||| ||||| |||
Sbjct 422707 TGGTAAATGGTTTCAAAGATGAGAACATTCAACTCTGCAGCCTCGGGGCTGTCGTAGGGC 422648
Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCAC 138908
|| || ||| || | ||| |||| ||||| || || || |||||
Sbjct 422647 ATTCGTAGCTTCATAAACACGTCAGCCAGGCCCTGAACACCCAC 422604
>seq29
Length=2752704
Score = 118 bits (130), Expect = 1e-21
Identities = 455/712 (64%), Gaps = 11/712 (2%)
Strand=Plus/Plus
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
|||||||| ||||| || | | || ||||| ||| |||| |||| || | ||
Sbjct 57977 CTCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCA 58036
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| || || ||||| || | |||| | ||||| || ||| ||| ||||||||| ||
Sbjct 58037 CTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTC 58096
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481
|| ||||||| ||| | | || || || || | |||||| || |||
Sbjct 58097 GGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTT 58156
Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541
| || | ||| || || | || ||||||| || || || || || || | ||
Sbjct 58157 TCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGC 58216
Query 139542 GCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598
|| || ||| || || ||||| |||| ||| | | || || | || ||||
Sbjct 58217 ACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAG 58276
Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAG 139654
||| ||| | | |||| | | |||||||| || | | ||| ||| | || ||
Sbjct 58277 CATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGT----AG 58332
Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAAT 139714
|||||| || || | | | ||||| |||||| || | ||||| || | | | ||
Sbjct 58333 CTCGGATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGG 58392
Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774
| || ||||| || || ||| |||||||| ||| |||| || || || |
Sbjct 58393 TTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACG 58452
Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834
|||| | || || | || ||||| | ||||| || ||||| |||||
Sbjct 58453 ACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGT 58512
Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894
| | ||||| | | ||| || || ||||| | |||| | ||||||||||
Sbjct 58513 ACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATAC 58572
Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954
|||||||||||||||| | ||| |||||| || ||||| || || || | || |
Sbjct 58573 CGACAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCA 58632
Query 139955 tCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||| || | ||| ||||||||| |||||||||| | ||| |||| ||
Sbjct 58633 GCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTC 58684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897436912120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |