Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq23 221 2e-51
seq29 143 4e-28
seq2 109 9e-18
>seq23
Length=2267247
Score = 221 bits (244), Expect = 2e-51
Identities = 250/332 (75%), Gaps = 5/332 (2%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||| | |||||| ||| |||||| |||||||| || |||||
Sbjct 1857504 ACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTT 1857445
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| |||| ||| ||||| |||||||||||||||||||||||
Sbjct 1857444 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAA 1857385
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | | ||| ||||| |||| ||| | | || | | ||||||||| | |||||
Sbjct 1857384 GGCAATGAGTCGCTCTCCAAAGGTGGACT---CTTCGTCGGAGATCCACTTGAGGGCCCA 1857328
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578
|| ||||||||| | | |||| | || ||||||||| || |||| ||| | ||
Sbjct 1857327 GTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCG-CT 1857269
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| |||||||||| ||| |||||||| || |||||||||||||| ||||||||||| |
Sbjct 1857268 CTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCT 1857209
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670
| || |||||||||||| || ||||| |||
Sbjct 1857208 CCATCATGATCTGGAAGCCGTAGAAGCACTTG 1857177
Score = 123 bits (136), Expect = 4e-22
Identities = 195/279 (70%), Gaps = 3/279 (1%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| ||| |||||||||| | || ||||| ||| || | ||||||||||
Sbjct 1857185 AAGCACTTGGCCTCGGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTA 1857126
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
||||| |||||| ||| || || || ||||| ||||| ||| ||| ||||| |||
Sbjct 1857125 ACGATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGAAGAACCGCTCATCG 1857066
Query 796261 TCGCTGAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317
| | |||| | |||||| || |||| || || || | |||||| || |||
Sbjct 1857065 TTGTTGAGTCTGTTCTCCCAGTCACCCATGTCCTTTCCAAGATCAATCTCCTCAGCTGTC 1857006
Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAAC 796377
|| || |||||||||||||| |||||||||| ||| || ||||| ||||||||||
Sbjct 1857005 CAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATTTCGTGGTACTGGATGGGGAAG 1856946
Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416
|| ||||| || ||||||| ||||| ||||||
Sbjct 1856945 AGCACAAACCGTCGATGGTTCTCCTTGAGCAGAGGCTCG 1856907
Score = 95.1 bits (104), Expect = 2e-13
Identities = 176/253 (70%), Gaps = 8/253 (3%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||| ||| ||| ||||||||||||||||||||| | |
Sbjct 1857826 TGACACCGGCCTTCTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCA 1857767
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCAC---C 794007
| ||||| |||||| | ||| ||||||| | || || | | || | | |
Sbjct 1857766 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGG--AGTTA-TACACCTTGGAGTTAC 1857710
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
|||| | | ||||| ||||| ||||| || || |||||||||||||| || |||||
Sbjct 1857709 CGAGAGCAACTAGCAGACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGT 1857650
Query 794068 TCATGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126
|||| || | || |||| |||||| | || | | ||||| | |||||| | ||
Sbjct 1857649 TCATACCAAGCAG-ACCACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACA 1857591
Query 794127 GCCTCGATGATGA 794139
||||||| ||||
Sbjct 1857590 GCCTCGACAATGA 1857578
>seq29
Length=2752704
Score = 143 bits (158), Expect = 4e-28
Identities = 325/489 (66%), Gaps = 15/489 (3%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| || || || || || |||| |||| |||| || ||||||||||| | ||||||||
Sbjct 58238 CTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTGGA 58297
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||| || || || | ||||| ||| | || || | ||||| | | ||
Sbjct 58298 GGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCGGATGTTGTGGATAGACAGACC 58357
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| |||||||| | |||||| || || || || |||| || || ||||||||||| ||
Sbjct 58358 GATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATGCCGTC 58417
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||||| ||||||||| | || || |||||||| | || || | | || ||
Sbjct 58418 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGAGTTCC 58477
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||| ||| |||| ||||| | || ||| | ||| || ||||| | ||||||
Sbjct 58478 GGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTGTAGGT 58537
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | | || || | | || |||| || | | |||| | |||
Sbjct 58538 CTCAATGGCCCGGGCAA-----TGTT----GTCG------CCGTGGATACCGACAGAGAC 58582
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||| | |||||||||||| | || || || || |||||| |
Sbjct 58583 TCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCAGGTATGC 58642
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| ||||||| | ||||||||| ||||| | ||| || |||| | | |||||
Sbjct 58643 TCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGC 58702
Query 2074020 GGCGTCGAG 2074028
| ||| |||
Sbjct 58703 GCCGTTGAG 58711
Score = 107 bits (118), Expect = 3e-17
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 1485504 GGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGT 1485563
||||||| |||| || || ||| | | || || || || |||||||||||||| || |
Sbjct 1927689 GGCGTGCTTGGCGAGCTCACCGGGGAGAATGAGTCGGACAGCGGTCTGGATCTCTCGAGA 1927630
Query 1485564 GCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTC 1485623
||| ||| |||| | | ||||| | |||||||||| ||| || ||
Sbjct 1927629 AGTGATGGTGGACTTCTTGGTGTAGGTGGCCAGCTTGGAGGCCTCGGTGGCGACTCGCTC 1927570
Query 1485624 GATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTC 1485683
| |||||||||||||| ||||||||||| ||||| | | | ||||||| || |||
Sbjct 1927569 AAAGATGTCGTTGACAAAGGAGTTCATGATAGACATGGCTCGGGTGGAGATACCAGTGTC 1927510
Query 1485684 GGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||||| |||||| |||||||||||
Sbjct 1927509 AGGGTGGGTCTGCTTCAGCACCTTGTA 1927483
>seq2
Length=696565
Score = 109 bits (120), Expect = 9e-18
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| |||||| | || || |||| || ||||| |||||||||||||| || || ||||
Sbjct 186264 CTGTTTGAGATTATTCTGACCGCAAATTACCTGGACATCAAGCCCCTGCTGGACGTGGGC 186323
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| ||||||||| | |||||||||||| | |||||||| || || |||||
Sbjct 186324 TGCAAGACGGTGGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTC 186383
Query 2035749 AACAT 2035753
|||||
Sbjct 186384 AACAT 186388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916243315137731
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