Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq29 251 7e-62
seq23 161 1e-34
seq14 120 3e-22
seq9 98.7 1e-15
>seq29
Length=2752704
Score = 251 bits (278), Expect = 7e-62
Identities = 1187/1861 (64%), Gaps = 57/1861 (3%)
Strand=Plus/Plus
Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010
|| ||||| |||||||| || |||||||| ||| | ||| ||||| ||||| ||
Sbjct 56871 GTTCGCAGGTAGTACATACCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAG 56930
Query 148011 GACATGAGCGTGTAC---GTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCA 148067
| ||||| || | || |||| | | | || | ||||| |||||||
Sbjct 56931 G---TGAGCTTGCCCATGGTAGGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCA 56987
Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127
||||| | | |||||||||||||| ||||||| |||||| |||||||| |
Sbjct 56988 ATGAAGGGGGATCGGTCAGCGGCCATCTCAATGATTCGCTTCTGAGAAATCTCCCACACG 57047
Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187
||||||||||| |||||| | | ||||||| | |||| |||||| || ||| |
Sbjct 57048 GTCTTGTACAGGTCCTTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGATCCGTTG 57107
Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247
| |||| ||| | || ||| || | | ||| | ||| | |||||| | |
Sbjct 57108 TCAGCAACAATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCTCAACCAGGTCCTTG 57167
Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTT 148306
| ||| | | || || | ||| || || || || || || || || ||| || | |||
Sbjct 57168 AGCAGCCAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCG-AGAGTAAATGTT 57226
Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366
| || | || || || |||| ||| || | |||||| | || | || |||||
Sbjct 57227 GGAAGTGTAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGG 57286
Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426
|||| || |||| ||||||||| |||| ||| || | || ||| ||| ||| |
Sbjct 57287 CATGGGAGCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATC 57346
Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486
|||| ||||| ||| || || ||||||||||| | ||| |||| || ||
Sbjct 57347 GTCCCACTCCCACAGCTCGGAAGGAGTCACGTTCCAGAGATCGAACTGGAGGTCACCCTT 57406
Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546
| || ||| ||||| | | | ||| | |||| | | |||| ||| |
Sbjct 57407 GGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGA 57466
Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGA 148606
|| |||| || |||| ||| || |||||| || || |||||||| | |||
Sbjct 57467 GGCTTCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 57526
Query 148607 CTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCAC 148666
|||| || | || | || || || || | |||||| || ||||| || ||||
Sbjct 57527 CTCGGACTCAAATGGGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAG 57586
Query 148667 GCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC-TCGAGCGGATAGTGGTTGC 148725
||||||| |||||| ||||| || | | ||| || ||| |||| ||| |
Sbjct 57587 AGCAATGGGTCGGTGTCGCATGTTAGA-CTTCTTGGCCTCGGGGACCGGGTAGTAGTTTC 57645
Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAA 148785
|||||||||| || || || ||||| | ||||| | ||| | ||||| | |
Sbjct 57646 GGTCGATGATAGCGTTGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGA 57705
Query 148786 AATCGTA---------CTTGTCATCTACGA--TGCATCGGT--TCACGGCGATAGAGGCT 148832
| ||||| |||| ||| ||| || || || ||||| || ||
Sbjct 57706 AGTCGTAGAACGAGTTGGTGTCGTCT-CGAGTAACAAAAGTGGGCAGAGCGATGGAAGCC 57764
Query 148833 AGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG 148892
|| ||||| || || |||||| || | ||||||||| ||||| |||||| ||
Sbjct 57765 AGGTTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTA 57824
Query 148893 CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTAC 148952
| || || || | |||||| || ||| ||| | |||||| | ||||||||||
Sbjct 57825 GAAGACTTAATTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAC 57884
Query 148953 AGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCC 149009
|||||| | || ||| | || ||| || | || | ||| ||| | |
Sbjct 57885 AGCATGAAGGGGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACC---ACAGCTTC 57941
Query 149010 TGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065
|| || | | || | |||| | || ||||||| |||||| |||||| |
Sbjct 57942 TGGGCAGGGA--TG--GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTG 57997
Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125
|| ||| | || || ||| ||||| ||||||||||||| || |||||||| || |
Sbjct 57998 CTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGT 58057
Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185
||| | ||| | | || |||| ||| ||||| ||||| | ||| || || |
Sbjct 58058 CCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAA 58117
Query 149186 GAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTG-AGCACGCTG 149243
||||| || | || | | ||||| || ||| ||||| | | || || | |
Sbjct 58118 CAGGTCTCG-GGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTC-G 58175
Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCG 149300
|| || || ||||||| ||||||| ||||| || | || || ||| |||||
Sbjct 58176 AAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCT 58235
Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360
||||| || |||| || | |||||||| | || || | ||| || | || || ||
Sbjct 58236 CCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTG 58295
Query 149361 GCAGTGCCGTTAG-TAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419
| || ||||||| | ||| |||| ||| ||||| | ||||| | | |||
Sbjct 58296 GAGGTTCCGTTAGTTCCAGC-AATGTAGGAGCCAGTAGCTCGGATGTTGTGGA--TAGAC 58352
Query 149420 --GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATG 149477
||||| |||||| | |||| || || || ||| ||| || |||||||
Sbjct 58353 AGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATG 58412
Query 149478 CCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGC 149537
|| |||||| |||| ||||||| | | || || ||||| |||| || || |
Sbjct 58413 CCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGA 58472
Query 149538 GTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCG 149597
|| ||||| | | | |||||| ||||| || || || ||||| ||| | |
Sbjct 58473 GTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTG 58532
Query 149598 TACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGC 149657
|| | ||| | | ||| | |||| ||||| ||||| || | | ||| ||||| | |
Sbjct 58533 TAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATC 58592
Query 149658 ATATGCTGCGGTCGCTCCGCCA---CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714
|| || || |||||||| || | | ||| | | |||| ||| | ||
Sbjct 58593 ATCTGTTGGGGTCGCTCGGCAACAGCACCGTT---GACTCGCAGCAGGTATGCTCGCTCC 58649
Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCG 149774
|| |||||| |||||||||| |||||| ||||| ||| ||| | ||||||| ||| |
Sbjct 58650 AGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGCGCCGTTG 58709
Query 149775 A 149775
|
Sbjct 58710 A 58710
>seq23
Length=2267247
Score = 161 bits (178), Expect = 1e-34
Identities = 368/545 (68%), Gaps = 19/545 (3%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||| || || ||||| |||||||| || ||||| ||| || ||||| |
Sbjct 1857813 CTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTC 1857754
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | | |||| | || | | || | || |||||
Sbjct 1857753 CATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAG 1857694
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || |||||||| ||||||| |||||| || |||||||| || |||| |
Sbjct 1857693 ACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGA-C 1857635
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
||| || | || | || | ||||||| ||| ||| | || ||||| || |||
Sbjct 1857634 CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTC---GACAATGA 1857578
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGT--GTTCGATGCGC---GTTCGGTAGTA-CAGGC 120643
|| | | | | |||| | ||| | | | || || | | |||||
Sbjct 1857577 CGTCCTCAA------CAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGC 1857524
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| |||||||| |||||||| |||||||| || || || ||||||||| || || ||||
Sbjct 1857523 AGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGC 1857464
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
| ||||||| ||| | |||||| |||| |||| ||| || ||| || ||||| |
Sbjct 1857463 CAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGA 1857404
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCG 120822
|||||| ||| ||||||||| | | ||||| | || || | | |||| | | |
Sbjct 1857403 TGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGAC-TCTTCGTCGGAG 1857345
Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTC 120882
|||||||| | |||||| ||||||||||| | ||| || || ||||| |||||
Sbjct 1857344 ATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 1857285
Query 120883 AGCAG 120887
| |||
Sbjct 1857284 AACAG 1857280
>seq14
Length=2997610
Score = 120 bits (132), Expect = 3e-22
Identities = 154/209 (74%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| ||| | || || || |||||||||||||| |
Sbjct 1945206 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG--TCCTCGAGCTGCTTAC 1945263
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || ||||| || |||||||| |||||| ||
Sbjct 1945264 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACT 1945323
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||| | || |||||| |||| ||||| || ||||| || || |
Sbjct 1945324 TGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGGG 1945383
Query 133642 TTTTTACGAAAATCTGCA-TGGCTTATTT 133669
| || || || || |||| ||| ||| ||
Sbjct 1945384 TCTTGACAAAGATTTGCACTGGGTTAGTT 1945412
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| || | || || || |||||||||||||| |
Sbjct 1826643 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG--TCCTCGAGCTGCTTAC 1826700
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || || || || |||||||| |||||| ||
Sbjct 1826701 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACT 1826760
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || || ||||| || |
Sbjct 1826761 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCGGTAAGGG 1826820
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || |||||||||||
Sbjct 1826821 TCTTGACAAAAATCTGCAT 1826839
>seq9
Length=1942798
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535
|| |||||||| ||||||||||| |||| || |||||||||||| || |||||| |||
Sbjct 1511452 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1511393
Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595
||||||||| | || ||||||| | |||| || | | | || ||||| ||||||
Sbjct 1511392 TTCAACCCCTTCAAGAAGAACCACGGTGGTCCCACCGACTCTGAGCGACACGTTGGTGAC 1511333
Query 116596 CTGGGCAAC 116604
|| || |||
Sbjct 1511332 CTCGGAAAC 1511324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420624759960
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