Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq29 251 7e-62 seq23 161 1e-34 seq14 120 3e-22 seq9 98.7 1e-15 >seq29 Length=2752704 Score = 251 bits (278), Expect = 7e-62 Identities = 1187/1861 (64%), Gaps = 57/1861 (3%) Strand=Plus/Plus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 || ||||| |||||||| || |||||||| ||| | ||| ||||| ||||| || Sbjct 56871 GTTCGCAGGTAGTACATACCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAG 56930 Query 148011 GACATGAGCGTGTAC---GTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCA 148067 | ||||| || | || |||| | | | || | ||||| ||||||| Sbjct 56931 G---TGAGCTTGCCCATGGTAGGGTCCTTGATGTGAATGTTGAGGGACTGAGACTGGTCA 56987 Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127 ||||| | | |||||||||||||| ||||||| |||||| |||||||| | Sbjct 56988 ATGAAGGGGGATCGGTCAGCGGCCATCTCAATGATTCGCTTCTGAGAAATCTCCCACACG 57047 Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187 ||||||||||| |||||| | | ||||||| | |||| |||||| || ||| | Sbjct 57048 GTCTTGTACAGGTCCTTGATTTCCTGGGGAATGTTGGGGATGTTCTGCACGGATCCGTTG 57107 Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247 | |||| ||| | || ||| || | | ||| | ||| | |||||| | | Sbjct 57108 TCAGCAACAATTCGGTTCTTCATGGTCTCGTTCCACAGGCCAACCTCAACCAGGTCCTTG 57167 Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTT 148306 | ||| | | || || | ||| || || || || || || || || ||| || | ||| Sbjct 57168 AGCAGCCAGGGGTTGACAATCTGGAATTCACCAGCAAGAACTCGTCG-AGAGTAAATGTT 57226 Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366 | || | || || || |||| ||| || | |||||| | || | || ||||| Sbjct 57227 GGAAGTGTAGGGCTCGAAGCACTCATTGAAACCAAGAATCTGGGAAGTGGAGGCAGTGGG 57286 Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426 |||| || |||| ||||||||| |||| ||| || | || ||| ||| ||| | Sbjct 57287 CATGGGAGCGACCAACAGCGAGTTTCGCATACCAGTCTTCATGATCTTGGCCTTGAGATC 57346 Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486 |||| ||||| ||| || || ||||||||||| | ||| |||| || || Sbjct 57347 GTCCCACTCCCACAGCTCGGAAGGAGTCACGTTCCAGAGATCGAACTGGAGGTCACCCTT 57406 Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546 | || ||| ||||| | | | ||| | |||| | | |||| ||| | Sbjct 57407 GGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGA 57466 Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGA 148606 || |||| || |||| ||| || |||||| || || |||||||| | ||| Sbjct 57467 GGCTTCGACAGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 57526 Query 148607 CTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCAC 148666 |||| || | || | || || || || | |||||| || ||||| || |||| Sbjct 57527 CTCGGACTCAAATGGGAGTCGTAGAGCCATGAAGGTGTCGGCCAGACCCTGGACACCCAG 57586 Query 148667 GCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC-TCGAGCGGATAGTGGTTGC 148725 ||||||| |||||| ||||| || | | ||| || ||| |||| ||| | Sbjct 57587 AGCAATGGGTCGGTGTCGCATGTTAGA-CTTCTTGGCCTCGGGGACCGGGTAGTAGTTTC 57645 Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAA 148785 |||||||||| || || || ||||| | ||||| | ||| | ||||| | | Sbjct 57646 GGTCGATGATAGCGTTGAGGTTTCGCACAATGACCTTGGCAATGTCGTGCAGCTTCTTGA 57705 Query 148786 AATCGTA---------CTTGTCATCTACGA--TGCATCGGT--TCACGGCGATAGAGGCT 148832 | ||||| |||| ||| ||| || || || ||||| || || Sbjct 57706 AGTCGTAGAACGAGTTGGTGTCGTCT-CGAGTAACAAAAGTGGGCAGAGCGATGGAAGCC 57764 Query 148833 AGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG 148892 || ||||| || || |||||| || | ||||||||| ||||| |||||| || Sbjct 57765 AGGTTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCTACAATCTCACAGCACAGGTTA 57824 Query 148893 CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTAC 148952 | || || || | |||||| || ||| ||| | |||||| | |||||||||| Sbjct 57825 GAAGACTTAATTGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAC 57884 Query 148953 AGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCC 149009 |||||| | || ||| | || ||| || | || | ||| ||| | | Sbjct 57885 AGCATGAAGGGGTTGCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACC---ACAGCTTC 57941 Query 149010 TGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065 || || | | || | |||| | || ||||||| |||||| |||||| | Sbjct 57942 TGGGCAGGGA--TG--GTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTG 57997 Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125 || ||| | || || ||| ||||| ||||||||||||| || |||||||| || | Sbjct 57998 CTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATCAGGGT 58057 Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185 ||| | ||| | | || |||| ||| ||||| ||||| | ||| || || | Sbjct 58058 CCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCACAGAGCCAGGAA 58117 Query 149186 GAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTG-AGCACGCTG 149243 ||||| || | || | | ||||| || ||| ||||| | | || || | | Sbjct 58118 CAGGTCTCG-GGCTCGAATCTCTTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTC-G 58175 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCG 149300 || || || ||||||| ||||||| ||||| || | || || ||| ||||| Sbjct 58176 AAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGCACCAGGTCGCTTGTTGCCT 58235 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 ||||| || |||| || | |||||||| | || || | ||| || | || || || Sbjct 58236 CCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAGCATGGGCACGATACCGTTG 58295 Query 149361 GCAGTGCCGTTAG-TAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 | || ||||||| | ||| |||| ||| ||||| | ||||| | | ||| Sbjct 58296 GAGGTTCCGTTAGTTCCAGC-AATGTAGGAGCCAGTAGCTCGGATGTTGTGGA--TAGAC 58352 Query 149420 --GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATG 149477 ||||| |||||| | |||| || || || ||| ||| || ||||||| Sbjct 58353 AGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTTGAGGGTATCGTAGATG 58412 Query 149478 CCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGC 149537 || |||||| |||| ||||||| | | || || ||||| |||| || || | Sbjct 58413 CCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGAGGCTGGGGA 58472 Query 149538 GTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCG 149597 || ||||| | | | |||||| ||||| || || || ||||| ||| | | Sbjct 58473 GTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTTCTGAGACATATAGTTG 58532 Query 149598 TACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGC 149657 || | ||| | | ||| | |||| ||||| ||||| || | | ||| ||||| | | Sbjct 58533 TAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGACAGAGACTCGCATGATC 58592 Query 149658 ATATGCTGCGGTCGCTCCGCCA---CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714 || || || |||||||| || | | ||| | | |||| ||| | || Sbjct 58593 ATCTGTTGGGGTCGCTCGGCAACAGCACCGTT---GACTCGCAGCAGGTATGCTCGCTCC 58649 Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCG 149774 || |||||| |||||||||| |||||| ||||| ||| ||| | ||||||| ||| | Sbjct 58650 AGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAATGGCGCCGTTG 58709 Query 149775 A 149775 | Sbjct 58710 A 58710 >seq23 Length=2267247 Score = 161 bits (178), Expect = 1e-34 Identities = 368/545 (68%), Gaps = 19/545 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| ||| || || ||||| |||||||| || ||||| ||| || ||||| | Sbjct 1857813 CTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTC 1857754 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | | |||| | || | | || | || ||||| Sbjct 1857753 CATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACTAGCAG 1857694 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || |||||||| ||||||| |||||| || |||||||| || |||| | Sbjct 1857693 ACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGA-C 1857635 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 ||| || | || | || | ||||||| ||| ||| | || ||||| || ||| Sbjct 1857634 CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTC---GACAATGA 1857578 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGT--GTTCGATGCGC---GTTCGGTAGTA-CAGGC 120643 || | | | | |||| | ||| | | | || || | | ||||| Sbjct 1857577 CGTCCTCAA------CAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGC 1857524 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| |||||||| |||||||| || || || ||||||||| || || |||| Sbjct 1857523 AGGCAAAGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGC 1857464 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||||| ||| | |||||| |||| |||| ||| || ||| || ||||| | Sbjct 1857463 CAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGA 1857404 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCG 120822 |||||| ||| ||||||||| | | ||||| | || || | | |||| | | | Sbjct 1857403 TGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGAC-TCTTCGTCGGAG 1857345 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTC 120882 |||||||| | |||||| ||||||||||| | ||| || || ||||| ||||| Sbjct 1857344 ATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 1857285 Query 120883 AGCAG 120887 | ||| Sbjct 1857284 AACAG 1857280 >seq14 Length=2997610 Score = 120 bits (132), Expect = 3e-22 Identities = 154/209 (74%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| ||| | || || || |||||||||||||| | Sbjct 1945206 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCG--TCCTCGAGCTGCTTAC 1945263 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||| || |||||||| |||||| || Sbjct 1945264 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACT 1945323 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | || |||||| |||| ||||| || ||||| || || | Sbjct 1945324 TGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGGG 1945383 Query 133642 TTTTTACGAAAATCTGCA-TGGCTTATTT 133669 | || || || || |||| ||| ||| || Sbjct 1945384 TCTTGACAAAGATTTGCACTGGGTTAGTT 1945412 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || | || || || |||||||||||||| | Sbjct 1826643 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG--TCCTCGAGCTGCTTAC 1826700 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || || || |||||||| |||||| || Sbjct 1826701 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACT 1826760 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || ||||| || | Sbjct 1826761 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCGGTAAGGG 1826820 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 1826821 TCTTGACAAAAATCTGCAT 1826839 >seq9 Length=1942798 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 || |||||||| ||||||||||| |||| || |||||||||||| || |||||| ||| Sbjct 1511452 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1511393 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| | || ||||||| | |||| || | | | || ||||| |||||| Sbjct 1511392 TTCAACCCCTTCAAGAAGAACCACGGTGGTCCCACCGACTCTGAGCGACACGTTGGTGAC 1511333 Query 116596 CTGGGCAAC 116604 || || ||| Sbjct 1511332 CTCGGAAAC 1511324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420624759960