Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq23 172 7e-38 >seq23 Length=2267247 Score = 172 bits (190), Expect = 7e-38 Identities = 352/516 (68%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||||||||||| ||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 1857800 ACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 1857741 Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854 ||||| | ||||| | | ||| | || | | | || ||||| || | || Sbjct 1857740 GGGTTGGTGGAGTTATACACCTTGGAGTTACCGAGAGCAACT--AGCAGACGGTCAGCGA 1857683 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914 | |||| ||||||| ||||| || || ||||||||| | || ||| || || | Sbjct 1857682 CAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAGACCACAGGGCAGAG 1857623 Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974 |||| | |||| ||| ||| ||| | ||||| || | || | | | || ||| Sbjct 1857622 CGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCAACAATCT 1857563 Query 129975 CCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033 | | |||| || | ||| || | ||| || |||||| || ||| ||| Sbjct 1857562 TCTTTGAGGGTCGGTT-CTCAAGGTGCGAGAAAAGCAGGCAGGCAAAGTCAGTGTGCAGA 1857504 Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| ||||||||||| || || |||||| || || ||||||||||| |||||| Sbjct 1857503 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTC 1857444 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | || ||||| ||||||||||| ||||| || || || Sbjct 1857443 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAG 1857384 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212 |||| ||| ||||| |||||| | | ||| || | | |||||| | ||||| | Sbjct 1857383 GCAATGAGTCGCTCTCCAAAGGTG-GACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTC 1857325 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 |||||||||| ||| || |||| ||||| ||| || Sbjct 1857324 GGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGC 1857289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434975817240