Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq14 190 5e-43
seq20 95.1 3e-14
>seq14
Length=2997610
Score = 190 bits (210), Expect = 5e-43
Identities = 176/223 (79%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||||| ||||| || || ||||||||||| || |||||||| || || | ||||||
Sbjct 1826619 CGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTT 1826678
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || |||||||| || ||||||||||| || || ||||| || |||| |||
Sbjct 1826679 CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCC 1826738
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| ||||||||||| || || ||||||||
Sbjct 1826739 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGG 1826798
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116
||||| ||||| || || || ||||| ||||| | ||||||||
Sbjct 1826799 GTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1826841
Score = 167 bits (184), Expect = 5e-36
Identities = 169/220 (77%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| |||| || || || || ||||||||||| || |||||||| || || | ||| ||
Sbjct 1945182 CGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTT 1945241
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || |||||||| || ||||||||||| || || ||||| || || | |||
Sbjct 1945242 CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCC 1945301
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| || |||||||||||| || ||||||||
Sbjct 1945302 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGG 1945361
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113
||||| ||||| || || || ||||| ||||| | ||||
Sbjct 1945362 GTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1945401
>seq20
Length=352371
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| || |||||||| || ||||| || || || || ||||| ||||||| ||| |||
Sbjct 352359 CCATCCTCGAGCTGCTTACCAGCGAAAATCAGTCGCTGCTGGTCCGGAGGAATTCCCTCC 352300
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058
|||||||| ||||| || ||||| ||||||||||| |||
Sbjct 352299 TTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAG 352258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151569302585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |