Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq23 152 4e-32
>seq23
Length=2267247
Score = 152 bits (168), Expect = 4e-32
Identities = 558/868 (64%), Gaps = 7/868 (1%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| ||||| |||||||| ||||| || || || ||||| | | || || ||
Sbjct 1857815 TTCTGGTAGTCGGACACTCGCTTCTCGAAAAAGTTGGTCTTGCCGGCCAGAGAGATGTTC 1857756
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375
||||| || || || || || || | ||| || | || || ||||| || ||
Sbjct 1857755 TCCATGAAGTCGAAGGGGTTGGTGGAGTTATACACCTTGGAGTTACCG-AGAGCAACTAG 1857697
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
|| |||||||| ||||| || || ||||||| ||| || | | ||| || |||| |
Sbjct 1857696 CAGACGGTCAGCGACAAACTCGATGTACTGGCACATCAGCTTGGCGTTCATACCAAGCAG 1857637
Query 4436 TCTCACAGGT-AGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| |||||| || |||| || | ||||| || || || || || || || |
Sbjct 1857636 AC-CACAGGGCAGAGCGTCAGTAAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGA 1857578
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
|| | | | | || || ||| || | | || || | | || ||||
Sbjct 1857577 CGTCCTCAACAATCTTCTTTGAGGGTCGGTTCTCAAGGTGCGAGAAAAGCAGGCAGGCAA 1857518
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
| ||| |||| ||| ||||||| | || || ||||| || || || | || ||||
Sbjct 1857517 AGTCAGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGGCA 1857458
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| | ||||| ||| || ||||| || || | ||| || || || || ||||| ||||| |
Sbjct 1857457 TGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCT 1857398
Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATT 4734
| ||||||||||| || | | ||| || || | | ||| ||| ||||| |
Sbjct 1857397 CGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAGGTGGACTCTTCGTCGGAGATCCACT 1857338
Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794
| | ||||||| || |||||||| | ||| || || || | || ||||| || | |
Sbjct 1857337 TGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGT 1857278
Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854
|| || ||||| | || || ||||| || || || || | || || |
Sbjct 1857277 AGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTCTCGGAGT 1857218
Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914
| || || || || ||||| || ||||| ||||| | || || | | || || |
Sbjct 1857217 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCACCT 1857158
Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974
|| | |||| || || | ||| ||||| || |||||||| ||| ||||| || |
Sbjct 1857157 CGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACGATACCGTCGGAGGCAGCAAAGAATG 1857098
Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCA 5031
| | ||| || || || ||| || | || || || ||| || | ||||| ||
Sbjct 1857097 CGAGAACGTGGGAGATGAAGAACCGCTCATCGTTGTTGAGTCTGTTCTCCCAGTCACCCA 1857038
Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091
|| || | ||||| || ||| | ||||| || || || || || || |||||||
Sbjct 1857037 TGTCCTTTCCAAGATCAATCTCCTCAGCTGTCCAGAAAGAGGCCTCGGCCTTCTTGTACA 1856978
Query 5092 TAGACCAAATATCAGGATACTGAATCGG 5119
| ||| || || | ||||| || ||
Sbjct 1856977 TCTGCCAGATTTCGTGGTACTGGATGGG 1856950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049449064657
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |