Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq29 206 4e-48
seq23 141 1e-28
>seq29
Length=2752704
Score = 206 bits (228), Expect = 4e-48
Identities = 1173/1864 (63%), Gaps = 25/1864 (1%)
Strand=Plus/Plus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| ||||| | | || | | || || || ||||||||||| || || |||
Sbjct 56841 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 56900
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
||| |||| |||||||| |||||| || || ||| | || || ||
Sbjct 56901 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTAGGGTCCTTGATG 56960
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
||||| || | |||||| || || ||||| | || ||||| ||||| | ||
Sbjct 56961 TGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGTCAGCGGCCATCTCAATG 57020
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
|| ||| |||| ||| ||||| | || ||| | | | ||||| || | ||||
Sbjct 57021 ATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATTTCCTGGGGAATG 57080
Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|| | | || || | ||||||| |||| | |||| ||||| || || |||
Sbjct 57081 TTGGGGATGTTCTGCACGGATCCGTTGTCAGCAACAATTCGGTTCTTCATGGTCTCGTTC 57140
Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733
|||| ||| | | | || || || || ||||| || ||||| |||
Sbjct 57141 CACAGGCCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAATTCACCA 57200
Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793
| | |||| ||||| |||||| || || || || || | | |||||| ||
Sbjct 57201 GCAAGAACTCGTCGAGAGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTGAAACCA 57260
Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853
| ||| || | ||| || ||||| ||||| || || ||||| | |||| | ||||
Sbjct 57261 AGAATCTGGGAAGTGGAGGCAGTGGGCATGGGAGCGACCAACAGCGAGTTTCGCATACCA 57320
Query 75854 TGTGTTC-TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912
|| ||| |||| || | || |||| | ||| ||||| || || || || || |
Sbjct 57321 -GTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCACAGCTCGGAAGGAGTCACGTT 57379
Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972
|||||||||| | || || || ||| ||| || || | | || ||||| |
Sbjct 57380 CCAGAGATCGAACTGGAGGTCACCCTTGGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGC 57439
Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032
||||||| ||| | ||| || || || | || |||| || || || |||||
Sbjct 57440 ACCGTCCTCAAGAGCCATCTCGTAAGAGGCTTCGACAGCTCCGTGGTAGATGGTCTCGAA 57499
Query 76033 AATCTTCTTATTAAGAT-CTTGCGCTTCAAG-ACTATCAAAAGGATAATGTAAAAGAATA 76090
|||| | || || | |||| || | | ||| |||| || ||| | ||
Sbjct 57500 GATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACT--CAAATGGGAGTCGTAGAGCCATG 57557
Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150
|| | || || || ||||| || || | | |||| |||| |||| | | || || |
Sbjct 57558 AAGGTGTCGGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTTAGACTTC 57617
Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210
| || || || | ||||| || || || || || ||||| |||| ||||
Sbjct 57618 TTGGCCTCGGGGACCGGGTAGTAGTTTCGGTCGATGATAGCGTTGAGGTTTCGCACAATG 57677
Query 76211 ACTTTAACCACGTCCTTTAGTTT---GA----GAAAATCAAATT--TTCCATCTA---TC 76258
|| || | | ||| | || || || | | | | | || | | ||| |
Sbjct 57678 ACCTTGGCAATGTCGTGCAGCTTCTTGAAGTCGTAGAACGAGTTGGTGTCGTCTCGAGTA 57737
Query 76259 ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA 76318
||||| | ||||| || || || || || || || || ||||||| || | |
Sbjct 57738 ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAG 57797
Query 76319 TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTG 76378
|| | || ||||| ||| || ||| | |||| || ||||| || || | ||||||
Sbjct 57798 TACTCTACAATCTCACAGCACAGGTTAGAAGACTTAATTGTTCCGAGGTTCTTCTGGTTG 57857
Query 76379 CTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438
|||| ||| || |||||||| || || | || || | || | || |||| |
Sbjct 57858 GACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGGGGTTGCCGGACTCGGTCTGGCAG 57917
Query 76439 TCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTCTCTCT 76497
|||| ||| | ||| | | ||| | | || | | | ||| ||| |
Sbjct 57918 TCGAGAATGTGGTACCACA-GCTTCTGGGCAGGGATGGTTCGTCGGCCTCGGCCCTCCTT 57976
Query 76498 TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACA 76557
|| || || || | | | | ||| ||||| || | || || || | ||| || ||
Sbjct 57977 CTCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCA 58036
Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617
|| || || ||||||| | ||| ||| | | | || || || | ||| || || ||
Sbjct 58037 CTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTC 58096
Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677
|| ||||| ||||| | || || ||||||| || | ||||| ||||| |||||
Sbjct 58097 GGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTT 58156
Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737
| || || |||||| | ||||| ||||| || || || || || || | |
Sbjct 58157 TCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGC 58216
Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797
||| ||||| || || ||||||||||| | |||| ||| ||||| ||||| || | ||
Sbjct 58217 ACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAG 58276
Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857
||| || | || ||||| || || || || ||||||| ||| || ||| || ||
Sbjct 58277 CATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCG 58336
Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917
|| || ||||| || || || || || || || || || ||||||||| |||
Sbjct 58337 GATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTT 58396
Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977
| || || |||||||| || || || ||| ||||||| | ||| ||||| ||
Sbjct 58397 GAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGA 58456
Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037
||| ||| | || |||||| || || | | || || || || |||||||| | ||
Sbjct 58457 CATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTT 58516
Query 77038 TTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTA 77096
| ||| | ||| ||||| || ||||| | | || | || || || |
Sbjct 58517 CTGAGACATATAG-TTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGA 58575
Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156
||| ||| ||||| | ||| || || ||||| || || | || | | || ||
Sbjct 58576 CAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCA 58635
Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216
||||| | |||| || || || ||||| |||||||| | ||||||| ||||| |
Sbjct 58636 GGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGA 58695
Query 77217 TAAT 77220
|||
Sbjct 58696 GAAT 58699
>seq23
Length=2267247
Score = 141 bits (156), Expect = 1e-28
Identities = 360/545 (66%), Gaps = 6/545 (1%)
Strand=Plus/Minus
Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731
||||| || || ||||| |||||||| || || ||||| |||||||| || || | |||
Sbjct 1857482 TCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCG 1857423
Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791
||||| || || ||||| ||||| || || || || || || | |||| |||||| |
Sbjct 1857422 AAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAG 1857363
Query 46792 CTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848
||| || | | || |||||| | | ||||| || ||||||||||| | || ||
Sbjct 1857362 GTGGACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGG 1857303
Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908
|| || || || || || || || || || || | || || | ||||| ||
Sbjct 1857302 ATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCG 1857243
Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968
|| | || || | || || || ||||| || || ||||| || ||||| ||
Sbjct 1857242 ATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 1857183
Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028
|| | || || | ||| ||||| | ||||| ||| || ||||| || ||
Sbjct 1857182 CACTTGGCCTCGGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACG 1857123
Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088
|| || || |||||||| ||||| | || || || || | |||||| |
Sbjct 1857122 ATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGAAGAACCGCTCATCGTTG 1857063
Query 47089 GTCAGTTTATTC---CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145
| ||| | ||| |||||| || || ||| | ||| | || ||||||||||||
Sbjct 1857062 TTGAGTCTGTTCTCCCAGTCACCCATGTCCTTTCCAAGATCAATCTCCTCAGCTGTCCAG 1857003
Query 47146 AATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATA 47205
|| || ||||| || || || ||||| | ||| || || | || ||||| || || |
Sbjct 1857002 AAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATTTCGTGGTACTGGATGGGGAAGAGC 1856943
Query 47206 ACAAA 47210
|||||
Sbjct 1856942 ACAAA 1856938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934141561280
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