Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq29 206 4e-48 seq23 141 1e-28 >seq29 Length=2752704 Score = 206 bits (228), Expect = 4e-48 Identities = 1173/1864 (63%), Gaps = 25/1864 (1%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||| ||||| | | || | | || || || ||||||||||| || || ||| Sbjct 56841 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 56900 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 ||| |||| |||||||| |||||| || || ||| | || || || Sbjct 56901 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTAGGGTCCTTGATG 56960 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | |||||| || || ||||| | || ||||| ||||| | || Sbjct 56961 TGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGTCAGCGGCCATCTCAATG 57020 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 || ||| |||| ||| ||||| | || ||| | | | ||||| || | |||| Sbjct 57021 ATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATTTCCTGGGGAATG 57080 Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | | || || | ||||||| |||| | |||| ||||| || || ||| Sbjct 57081 TTGGGGATGTTCTGCACGGATCCGTTGTCAGCAACAATTCGGTTCTTCATGGTCTCGTTC 57140 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 |||| ||| | | | || || || || ||||| || ||||| ||| Sbjct 57141 CACAGGCCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAATTCACCA 57200 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | | |||| ||||| |||||| || || || || || | | |||||| || Sbjct 57201 GCAAGAACTCGTCGAGAGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTGAAACCA 57260 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853 | ||| || | ||| || ||||| ||||| || || ||||| | |||| | |||| Sbjct 57261 AGAATCTGGGAAGTGGAGGCAGTGGGCATGGGAGCGACCAACAGCGAGTTTCGCATACCA 57320 Query 75854 TGTGTTC-TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 || ||| |||| || | || |||| | ||| ||||| || || || || || | Sbjct 57321 -GTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCACAGCTCGGAAGGAGTCACGTT 57379 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 |||||||||| | || || || ||| ||| || || | | || ||||| | Sbjct 57380 CCAGAGATCGAACTGGAGGTCACCCTTGGAGGCAGGGGAGCCCTGGAAGGTCTCGTAGGC 57439 Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032 ||||||| ||| | ||| || || || | || |||| || || || ||||| Sbjct 57440 ACCGTCCTCAAGAGCCATCTCGTAAGAGGCTTCGACAGCTCCGTGGTAGATGGTCTCGAA 57499 Query 76033 AATCTTCTTATTAAGAT-CTTGCGCTTCAAG-ACTATCAAAAGGATAATGTAAAAGAATA 76090 |||| | || || | |||| || | | ||| |||| || ||| | || Sbjct 57500 GATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACT--CAAATGGGAGTCGTAGAGCCATG 57557 Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || | || || || ||||| || || | | |||| |||| |||| | | || || | Sbjct 57558 AAGGTGTCGGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTTAGACTTC 57617 Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210 | || || || | ||||| || || || || || ||||| |||| |||| Sbjct 57618 TTGGCCTCGGGGACCGGGTAGTAGTTTCGGTCGATGATAGCGTTGAGGTTTCGCACAATG 57677 Query 76211 ACTTTAACCACGTCCTTTAGTTT---GA----GAAAATCAAATT--TTCCATCTA---TC 76258 || || | | ||| | || || || | | | | | || | | ||| | Sbjct 57678 ACCTTGGCAATGTCGTGCAGCTTCTTGAAGTCGTAGAACGAGTTGGTGTCGTCTCGAGTA 57737 Query 76259 ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA 76318 ||||| | ||||| || || || || || || || || ||||||| || | | Sbjct 57738 ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAG 57797 Query 76319 TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTG 76378 || | || ||||| ||| || ||| | |||| || ||||| || || | |||||| Sbjct 57798 TACTCTACAATCTCACAGCACAGGTTAGAAGACTTAATTGTTCCGAGGTTCTTCTGGTTG 57857 Query 76379 CTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438 |||| ||| || |||||||| || || | || || | || | || |||| | Sbjct 57858 GACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGGGGTTGCCGGACTCGGTCTGGCAG 57917 Query 76439 TCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTCTCTCT 76497 |||| ||| | ||| | | ||| | | || | | | ||| ||| | Sbjct 57918 TCGAGAATGTGGTACCACA-GCTTCTGGGCAGGGATGGTTCGTCGGCCTCGGCCCTCCTT 57976 Query 76498 TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACA 76557 || || || || | | | | ||| ||||| || | || || || | ||| || || Sbjct 57977 CTCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACCGGGGCA 58036 Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617 || || || ||||||| | ||| ||| | | | || || || | ||| || || || Sbjct 58037 CTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAACAGGTC 58096 Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677 || ||||| ||||| | || || ||||||| || | ||||| ||||| ||||| Sbjct 58097 GGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTGGTTCTT 58156 Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737 | || || |||||| | ||||| ||||| || || || || || || | | Sbjct 58157 TCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGCAAAGGC 58216 Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797 ||| ||||| || || ||||||||||| | |||| ||| ||||| ||||| || | || Sbjct 58217 ACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGACACGCAG 58276 Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 ||| || | || ||||| || || || || ||||||| ||| || ||| || || Sbjct 58277 CATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCTCG 58336 Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917 || || ||||| || || || || || || || || || ||||||||| ||| Sbjct 58337 GATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACAGGTTTT 58396 Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977 | || || |||||||| || || || ||| ||||||| | ||| ||||| || Sbjct 58397 GAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGA 58456 Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037 ||| ||| | || |||||| || || | | || || || || |||||||| | || Sbjct 58457 CATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAAGTACTT 58516 Query 77038 TTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTA 77096 | ||| | ||| ||||| || ||||| | | || | || || || | Sbjct 58517 CTGAGACATATAG-TTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGATACCGA 58575 Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156 ||| ||| ||||| | ||| || || ||||| || || | || | | || || Sbjct 58576 CAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGCACCGTTGACTCGCAGCA 58635 Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216 ||||| | |||| || || || ||||| |||||||| | ||||||| ||||| | Sbjct 58636 GGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGA 58695 Query 77217 TAAT 77220 ||| Sbjct 58696 GAAT 58699 >seq23 Length=2267247 Score = 141 bits (156), Expect = 1e-28 Identities = 360/545 (66%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| |||||||| || || ||||| |||||||| || || | ||| Sbjct 1857482 TCGTTGGAGAAGGTGAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCG 1857423 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||| || || ||||| ||||| || || || || || || | |||| |||||| | Sbjct 1857422 AAAGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCAATGAGTCGCTCTCCAAAG 1857363 Query 46792 CTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 ||| || | | || |||||| | | ||||| || ||||||||||| | || || Sbjct 1857362 GTGGACTCTTCGTCGGAGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGATGCAGGGG 1857303 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || || || || || || || || || | || || | ||||| || Sbjct 1857302 ATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCTTTGGGGTCCTTGATGTATGTGTCG 1857243 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | || || || ||||| || || ||||| || ||||| || Sbjct 1857242 ATCAGCAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 1857183 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 || | || || | ||| ||||| | ||||| ||| || ||||| || || Sbjct 1857182 CACTTGGCCTCGGGGGCCTGCACCTCGCCGGAGAATCGCTCAACCAGGTTCTCGTTAACG 1857123 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || || || |||||||| ||||| | || || || || | |||||| | Sbjct 1857122 ATACCGTCGGAGGCAGCAAAGAATGCGAGAACGTGGGAGATGAAGAACCGCTCATCGTTG 1857063 Query 47089 GTCAGTTTATTC---CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 | ||| | ||| |||||| || || ||| | ||| | || |||||||||||| Sbjct 1857062 TTGAGTCTGTTCTCCCAGTCACCCATGTCCTTTCCAAGATCAATCTCCTCAGCTGTCCAG 1857003 Query 47146 AATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATA 47205 || || ||||| || || || ||||| | ||| || || | || ||||| || || | Sbjct 1857002 AAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATTTCGTGGTACTGGATGGGGAAGAGC 1856943 Query 47206 ACAAA 47210 ||||| Sbjct 1856942 ACAAA 1856938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934141561280